AMCG00018314


Basic Information

Item Value
gene id AMCG00018314
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8040510 ~ 8045893 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018314
ATGGTGAAGAGCAGTACAGACTTGCACCCCTACAGCTCTCTCAGAGCCGTGTTGCTGTTTTGGCGTCCCCAGAGTCCCAGCATGTGTCTCAGGCTGTGTCTGCTGCTGGGGCTGGTAGTGGTGGTGCTGGGCCAGAGGAAGCGCCCCGTCAAGGATGAGTGGGACTACCGGGATGGATCTGACAAGGTGAACATGAGAGGGGTGGCCAATCTGACTCAGGTGCTGGACAACTGGAAATTTGACATCATGACCCAGGTGAAGACCCTCTTGCAGAGTGACCACCAATCTGTCCTGCCAGACTACTCCAGGATCCAGCCCCTGTCCGAAGCCCTGGCCGACCTCTTCAAGGAGTTCAACGCCCTGAAGGAACGCCTGGGAGACCTGAGTGAGAAGTTTGTGGCCATCGAGACGTTTGTGGATGAGGTCAAGGGTGGGCAGGCCGCCGGTGGGGGAGCAAAACCCGTCAGCCCTGTCAAAAAGAGAGTGCTCACCAAGAAGAAAGCCCCTGCTTCCCAAAGCTCATAGAGCGTCATCTCAGGGCCTCAGTGTGGATGTACTCCTCTTAGGTAAAAGAGCAACCTATTGGAAACGCGAAGGTGATCGGTTCGCTGATGTTCTATGAGCTTTGCATACTGTCCGTATCTCTCCTCCCTGTACAATGCTGAAGACTAAGTGACTGACCCTCCTGATCAATGTTTCCTcaactgtgtatatattttttgtgccgGTTGTCAAAACATTAGCTATGAGAGTATGTTTCTTGGATACACTTCAACGCTCAGATATATGAACAACTACAACACACAAGGCTATGAGTTAACACAATCTTGTGCTGTAATATGAGTAGTTACCTTATGGCTCGGAGACTGTAAGGGTACAGAACACAATCATTCCCAGCAATTCTTTACAATATTGTGGGACATTAAAAACTATTGTAAATCTACCTATGCAAATCTTGATATAAATAGGGAAATTATCAGGTTGTTTAGAGAATAAACTGTATCTGTATTTTGGAGTGTATTTAATGTCTTTCAGTATCTTTACAAGTACTATAATGTAGTATTCCAAAGAATGTATAATCACTAAGAAGACGGAAATAATCAACAAAATACTAGGCTGTGGGCAGTACTGGTAACATTTCTATATGCTGCTTTAGGCTTTAGTCTGTACTTTCTGTCAAGTTAAACGtatatttttaagataaaatgcttttgtaatTCAATGAGATATTTCCTTCCTTGGTCTTAAAAATTGGACGTGTACGTAAATTCCATAATAAATGAATCATCCAGTGACTAAAACTGCCTGTTTTCAAAGCAATATAAGTTtatcaaatgcaaaaataaacttaataaaaCAGATATGCAGGATAGATACATCTCCGCATCAGTAATACCAACCACATGTACTTCCAATTGTTTCAgttgattttcagttttgataTGAATCTCTATATTTTTGGGAGAACTGAAAGAAAAGCCTCATActactacaaaaataaaaaaacatgatccaGTTACTTCAGCCATATATTGAtcacaattaatataaatatttttgtgttgtttctttgcTTCATGAAGTGCAAATCAAAAGTGGGTTCAGGGTGCTTAGAGCTTGgctaataaagaaaataataaaaaaa

Function

GO:

id name namespace
GO:0005540 hyaluronic acid binding molecular_function
GO:0031406 carboxylic acid binding molecular_function
GO:0043177 organic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018314 True 1645 mRNA 0.41 5 8040510 8045893

Neighbor

gene id symbol gene type direction distance location
AMCG00018311 gsg1l,LOC107738642,LOC107690243,LOC107685933,LOC103366699 coding downstream 67641 7944117 ~ 7972869 (-)
AMCG00018310 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107568127,LOC107690242,LOC107733860 coding downstream 145941 7883207 ~ 7894569 (-)
AMCG00018306 NA coding downstream 276751 7745096 ~ 7763759 (-)
AMCG00018307 NA coding downstream 296832 7721264 ~ 7743678 (-)
AMCG00018303 rbfox1,LOC107568067 coding downstream 879876 7153091 ~ 7160634 (-)
AMCG00018315 NA coding upstream 22308 8068201 ~ 8073947 (-)
AMCG00018316 NA coding upstream 33342 8079235 ~ 8081255 (-)
AMCG00018322 NA coding upstream 74095 8119988 ~ 8122196 (-)
AMCG00018323 NA coding upstream 77425 8123318 ~ 8140246 (-)
AMCG00018326 arl6ip1,LOC107658451 coding upstream 297237 8343130 ~ 8360156 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 171884 7860316 ~ 7868626 (-)
G115596 NA non-coding downstream 197802 7842337 ~ 7842708 (-)
G115580 NA non-coding downstream 297763 7742541 ~ 7742747 (-)
G115579 NA non-coding downstream 298300 7741974 ~ 7742210 (-)
G115577 NA non-coding downstream 306126 7734097 ~ 7734384 (-)
G115732 NA non-coding upstream 384233 8430126 ~ 8433570 (-)
G115807 NA non-coding upstream 471441 8517334 ~ 8519203 (-)
G115874 NA non-coding upstream 815980 8861873 ~ 8862377 (-)
G115949 NA non-coding upstream 1154907 9200800 ~ 9215817 (-)
G116058 NA non-coding upstream 1435017 9480910 ~ 9482152 (-)
G115581 NA other downstream 266618 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 1387737 6610633 ~ 6652773 (-)
G115320 NA other downstream 2089455 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 2673756 5356846 ~ 5366754 (-)
G115183 NA other downstream 2736081 5300107 ~ 5304429 (-)
AMCG00018344 NA other upstream 596003 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 620844 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 1193919 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 1728413 9774306 ~ 9779545 (-)
G116165 NA other upstream 1873153 9919046 ~ 9924582 (-)

Expression


Co-expression Network