AMCG00018316


Basic Information

Item Value
gene id AMCG00018316
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8079235 ~ 8081255 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018316
ATGAATGCTCCCGAGCAGACCGAAGATAAGTCAGACGCATGCGCTGCGAGCAGGGACGGTCTGTCAGCCTCTTTCCAGGCGTCTTTCTTTGCCATGTGTCGATTGGGCTCATTTCCCTGGCATgACCTGGAGAGGAGCTTGCAGGATGCTTCTTCTGCAGACGTGCTGAGCGACATCCTTCAGAAGCACGAGGCCTCGGCAGCAGAGCCCCTGGACGATGTCTACGACGCCTTGGCGGCCGTTTTGGGTGCAGAGGAAGAGCCAGTGTGCCACAAGAGCTACCTGCTGCCCTCGGGGGACTTTGTCACTGTTTCAGAGAGCGTGGCCGTCATCTCAGAGGGCACCACTGGCCTTGTGACCTGGGAGGCAGCGCTGCACCTGGCGGAGTGGGCCCTGGAGAACTTGGGGGCCTTCAGCGGCAGGTCGGTGCTGGAGCTGGGCAGCGGTGCGGGGCTGGCGGGGCTGGTCGTGTGTCGGGCCTGCAGCCCCCGCAGGTACACGTTCAGCGACTGCCACCCCTCCGTGCTGCAGCGGCTGCACGGGAACGTGCGTCTGAACGGACTGGCCCCCCGGCGAGACCCCTGCCCCGGCCCGGCCGTGTCTGTGGAAGAGCTGGACTGGGAGGCGGTGACCTCGGAGCGGCTGCAGGAGTTTGAGGCAGACACTGTTATCGCCTCAGACGTGGTGTACGACCCCGATATCGTCTGCTGTCTCGTGCAGCTGCTTTCAAAGATCTTGCAGTGCCCCCCCCAGGGCCGCTGTCCTGACGTCTACGTAGCCTCCACCGTTCGCAACCCAGAGACATACGGCCTCTTCAAGAGCGAGCTGAgtAAAGCTGCGATCAGACATCAAGCCATCCCAGGTCCCGAAAGACAGGTGTTCCCCTATAACCGCACCACGACAATAGAAATTCTAAAACTGTATTCATGa

Function

GO: NA

KEGG:

id description
K22696 EEF2KMT; protein-lysine N-methyltransferase EEF2KMT

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018316 True 930 mRNA 0.62 7 8079235 8081255

Neighbor

gene id symbol gene type direction distance location
AMCG00018315 NA coding downstream 5288 8068201 ~ 8073947 (-)
AMCG00018314 NA coding downstream 33342 8040510 ~ 8045893 (-)
AMCG00018311 gsg1l,LOC107738642,LOC107690243,LOC107685933,LOC103366699 coding downstream 106366 7944117 ~ 7972869 (-)
AMCG00018310 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107568127,LOC107690242,LOC107733860 coding downstream 184666 7883207 ~ 7894569 (-)
AMCG00018306 NA coding downstream 315476 7745096 ~ 7763759 (-)
AMCG00018322 NA coding upstream 38733 8119988 ~ 8122196 (-)
AMCG00018323 NA coding upstream 42063 8123318 ~ 8140246 (-)
AMCG00018326 arl6ip1,LOC107658451 coding upstream 261875 8343130 ~ 8360156 (-)
AMCG00018330 smg1,LOC107729485,LOC107564004 coding upstream 282118 8363373 ~ 8391140 (-)
AMCG00018328 syt17,LOC107729446,LOC107658452,LOC107674134,LOC107564007,LOC107732856 coding upstream 328647 8409902 ~ 8422902 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 210609 7860316 ~ 7868626 (-)
G115596 NA non-coding downstream 236527 7842337 ~ 7842708 (-)
G115580 NA non-coding downstream 336488 7742541 ~ 7742747 (-)
G115579 NA non-coding downstream 337025 7741974 ~ 7742210 (-)
G115577 NA non-coding downstream 344851 7734097 ~ 7734384 (-)
G115732 NA non-coding upstream 348871 8430126 ~ 8433570 (-)
G115807 NA non-coding upstream 436079 8517334 ~ 8519203 (-)
G115874 NA non-coding upstream 780618 8861873 ~ 8862377 (-)
G115949 NA non-coding upstream 1119545 9200800 ~ 9215817 (-)
G116058 NA non-coding upstream 1399655 9480910 ~ 9482152 (-)
G115581 NA other downstream 305343 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 1426462 6610633 ~ 6652773 (-)
G115320 NA other downstream 2128180 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 2712481 5356846 ~ 5366754 (-)
G115183 NA other downstream 2774806 5300107 ~ 5304429 (-)
AMCG00018344 NA other upstream 560641 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 585482 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 1158557 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 1693051 9774306 ~ 9779545 (-)
G116165 NA other upstream 1837791 9919046 ~ 9924582 (-)

Expression


Co-expression Network