AMCG00018329 (coq7,LOC106564609)


Basic Information

Item Value
gene id AMCG00018329
gene name coq7,LOC106564609
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8463319 ~ 8469629 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018329
TCAAGCCTAACACAGCTGTTTGGGAAGTGACGTCATTAGAGAGCGCCGGGCTGTCATGCACTGGTCCAACATGCACGACACCTCCGCGTTCAATGACTTTCTGTCTGCGGATTAATCCTCTTTAACCGTCACAATTATTGGACACTAAAAGGCTTCAGAAATGCAGCGAGCGCTAGGATCCCCTGTGCTGTTGAGCGAATTGAGGCCGGTTTTCTGCTCGGCTTTGGGTGCACGGCAGCTTTGTTTAAATGATCGTAAAGGTGTTCAGATGTGCAGAGCACAGGGGCTGCCCCTCTCACGGAGCTACAGCGTGCTGCCGCCGGTCCGAGACTGCGCCGAGAAGGCCATGCTGGACAGGATGTTGCGGGTCGATCACGCAGGCGAATACGGAGCCAACCGCATTTACGCTGGGCAGATGGCAGTGCTGGGAAGGACTCAGGCGGGACCAATTATTCAGCACATGTGGGATCAAGAGAAAAACCACCTGAAGGTGTTCGATGACCTCTTGGCCGAGAACAGAGTGAGACCCACCGTTCTGATGCCATTCTGGAACATCGCAGGGTTCGTCCTGGGTGCGAGCACTGCCATGCTGGGGAAGGAAGGGGCCATGGCCTGCACAGTGGCCGTAGAGGAGAGCATCTGTGAGCACTACAACAGCCAGATCAGAACActcatggaagaagacccagacAAATACAAAGATTTACTGCAAttaatcAAGAAGTTCCGGGATGAGGAAATGGAACACCACGATACAGGAATGGAACACGACGCAGAGATGGTGAGTCTGACTTTGAGCAGGACAGGCACCGGCATACTGGCTTTTGAAGAATGCAATACAAGTGGGCTGTAAGGCAGCGATATACATGTCTGAACGCATCTAGAACCAAAGCTGAAAGAAAACCATTAAGGTTATGTTTTGGATTTGTGTCAATGATGTTTAGTCAGTTTAAGTGATTTTGGCGAGTTTCCCTGCTTTGGATAGATGTAACCATTATACCGGCCCTTTTGATTTTGAGGGTCAGCGAACTGTAAATGTCATGATGCTAAACTCTTGATGAGACCGTCGTCCTGCACTGAAGTGTTTAGGGTGTAGTTGTGCCAGATCTTCAGGTAATATAGAGGGCTGCTGCTACAGTACTGCTTATTGTGGGAAATGGGTTTACTTTACAGCATGCGCATTGAATTCAGTTCTGGTTACCATGCTCTCTGTTTGATTCTATGGAAAAACAGTTATCTACCCAGaagaataaatgtgatttaaaaaaatagataaatatatttatttatttatatattggagAAAGTCAGGCAAGCAGGGTGACCTTTCAAGtggaatatgttttttaatctgcaatCGTAAATCTGAGTTGGAGCAATTaaatctgccttttttattacata

Function

symbol description
coq7 Predicted to enable 2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase activity. Predicted to be involved in several processes, including determination of adult lifespan; regulation of reactive oxygen species metabolic process; and ubiquinone biosynthetic process. Predicted to be located in membrane and mitochondrion. Predicted to be extrinsic component of mitochondrial inner membrane. Predicted to be active in mitochondrial inner membrane and nucleus. Human ortholog(s) of this gene implicated in primary coenzyme Q10 deficiency 8. Orthologous to human COQ7 (coenzyme Q7, hydroxylase).

NR:

description
PREDICTED: 5-demethoxyubiquinone hydroxylase, mitochondrial-like isoform X2

GO:

id name namespace
GO:0006744 ubiquinone biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018329 True 1404 mRNA 0.47 6 8463319 8469629

Neighbor

gene id symbol gene type direction distance location
AMCG00018331 NA coding downstream 14375 8443195 ~ 8448944 (-)
AMCG00018328 syt17,LOC107729446,LOC107658452,LOC107674134,LOC107564007,LOC107732856 coding downstream 40417 8409902 ~ 8422902 (-)
AMCG00018330 smg1,LOC107729485,LOC107564004 coding downstream 72179 8363373 ~ 8391140 (-)
AMCG00018326 arl6ip1,LOC107658451 coding downstream 103163 8343130 ~ 8360156 (-)
AMCG00018323 NA coding downstream 323073 8123318 ~ 8140246 (-)
AMCG00018334 NA coding upstream 49974 8519603 ~ 8541039 (-)
AMCG00018343 NA coding upstream 127464 8597093 ~ 8602734 (-)
AMCG00018341 clg6h16orf45,LOC101485480,LOC102775719,LOC108236367,LOC103355942 coding upstream 156248 8625877 ~ 8631588 (-)
AMCG00018342 NA coding upstream 208235 8677864 ~ 8684648 (-)
AMCG00018340 LOC108274424 coding upstream 218080 8687709 ~ 8688230 (-)
G115732 NA non-coding downstream 29749 8430126 ~ 8433570 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 594693 7860316 ~ 7868626 (-)
G115596 NA non-coding downstream 620611 7842337 ~ 7842708 (-)
G115580 NA non-coding downstream 720572 7742541 ~ 7742747 (-)
G115579 NA non-coding downstream 721109 7741974 ~ 7742210 (-)
G115807 NA non-coding upstream 47705 8517334 ~ 8519203 (-)
G115874 NA non-coding upstream 392244 8861873 ~ 8862377 (-)
G115949 NA non-coding upstream 731171 9200800 ~ 9215817 (-)
G116058 NA non-coding upstream 1011281 9480910 ~ 9482152 (-)
G116065 NA non-coding upstream 1057863 9527492 ~ 9527736 (-)
G115581 NA other downstream 689427 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 1810546 6610633 ~ 6652773 (-)
G115320 NA other downstream 2512264 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 3096565 5356846 ~ 5366754 (-)
G115183 NA other downstream 3158890 5300107 ~ 5304429 (-)
AMCG00018344 NA other upstream 172267 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 197108 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 770183 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 1304677 9774306 ~ 9779545 (-)
G116165 NA other upstream 1449417 9919046 ~ 9924582 (-)

Expression


Co-expression Network