AMCG00018349


Basic Information

Item Value
gene id AMCG00018349
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8783629 ~ 8810474 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018349
aTGGCCGTTAAGGTGGCGGAGATGCATGGCGAGCTGATTGAGTTCAACGAGAGGCTGTACCGCTCCTTGATGGCCAAGGACCACCTGATTTCCCAGATGCGGCAGGAGCTGATCGACCTGCGGGGCCCGGTGCCTGTCTTTGATGTGAGTTCTGAAGCCAGCGTCCTGCTCAAGGTCCCTGGAGATCTCAGCCAAACTTCAGAGGACCCCAGTCTGTCAGACTTTGAAATAGCTCAGCGGGCCCTTATCAACGTGTGGATCCCCTCCGTGTTCCTACGCGGCAGAGCTGCCAACGCTTACCATGTGTACCAGATTTACTCAGCCTGCGGGTTGGAGGCGACAGCTTTACGGCGAGACCTGGAGCGAGACAAGtCCACTCTGTTTTACGTGAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018349 True 396 mRNA 0.56 7 8783629 8810474

Neighbor

gene id symbol gene type direction distance location
AMCG00018345 snx29,LOC107554010 coding upstream 51701 8718740 ~ 8731928 (+)
AMCG00018338 NA coding upstream 116970 8650411 ~ 8666659 (+)
AMCG00018337 NA coding upstream 137521 8643855 ~ 8646108 (+)
AMCG00018335 NA coding upstream 159975 8604721 ~ 8623654 (+)
AMCG00018336 myh11,LOC103025732 coding upstream 190908 8553588 ~ 8592721 (+)
AMCG00018348 snx29,LOC107554039 coding downstream 2545 8813019 ~ 8847184 (+)
AMCG00018350 NA coding downstream 121616 8932090 ~ 8937602 (+)
AMCG00018351 NA coding downstream 127141 8937615 ~ 8941636 (+)
AMCG00018354 NA coding downstream 209529 9020003 ~ 9021898 (+)
AMCG00018356 NA coding downstream 313839 9124313 ~ 9130120 (+)
G115796 NA non-coding upstream 78726 8703157 ~ 8704903 (+)
G115678 NA non-coding upstream 410802 8352077 ~ 8372827 (+)
G115679 NA non-coding upstream 435793 8294416 ~ 8347836 (+)
G115640 NA non-coding upstream 689180 8094200 ~ 8094449 (+)
G115591 NA non-coding upstream 885449 7897940 ~ 7898180 (+)
G115873 NA non-coding downstream 51607 8862081 ~ 8862511 (+)
G115875 NA non-coding downstream 58068 8868542 ~ 8870342 (+)
G115896 NA non-coding downstream 225856 9036330 ~ 9036583 (+)
G115931 NA non-coding downstream 388403 9198877 ~ 9199440 (+)
G115939 NA non-coding downstream 417536 9228010 ~ 9230141 (+)
G115789 NA other upstream 88910 8693364 ~ 8694719 (+)
G115648 NA other upstream 661458 8119778 ~ 8122171 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 889180 7893627 ~ 7894449 (+)
AMCG00018280 NA other upstream 2036191 6710482 ~ 6747438 (+)
AMCG00018272 NA other upstream 2623013 6155488 ~ 6160616 (+)
AMCG00018358 polr3k,rpc11 other downstream 389183 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 429337 9239811 ~ 9245234 (+)
AMCG00018368 NA other downstream 629183 9439657 ~ 9447144 (+)
AMCG00018369 NA other downstream 670478 9480952 ~ 9486146 (+)
AMCG00018374 NA other downstream 701840 9512314 ~ 9513236 (+)

Expression


Co-expression Network