AMCG00018351


Basic Information

Item Value
gene id AMCG00018351
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8937615 ~ 8941636 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018351
ATGCCCAGTGTCGTCCCGTACCCGTGCACGTTGGGCTGTTGTTTTGttggcttgtttttgtttttgttgttgtttgtcccCGAAGACGTCTGCACGGAGCTGCCCACCAGACGCGTAGGTTATGACTGCCTGCAGGCGATGGGAGGCAGATTGGTGGAGGAAAAGAatggagagaagagagggatgTGTTTTGTCATGGATCTCCGGTGCACCTGGGGTCATACGCCTCAAGGGCTGCTGGAAATGACGCTCAGCATACCAAGATATTTTTGGCTTCGCTTTGAGGAACTGTGGTGTCGTCGAAATGTGCTAAGCAAGCCGGTTGTCACAGAGCTGGCATGTATTGGACGGCACCGCTTGCCTGTCATCTCTGTCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018351 True 378 mRNA 0.53 3 8937615 8941636

Neighbor

gene id symbol gene type direction distance location
AMCG00018350 NA coding upstream 13 8932090 ~ 8937602 (+)
AMCG00018348 snx29,LOC107554039 coding upstream 90431 8813019 ~ 8847184 (+)
AMCG00018349 NA coding upstream 127141 8783629 ~ 8810474 (+)
AMCG00018345 snx29,LOC107554010 coding upstream 205687 8718740 ~ 8731928 (+)
AMCG00018338 NA coding upstream 270956 8650411 ~ 8666659 (+)
AMCG00018354 NA coding downstream 78367 9020003 ~ 9021898 (+)
AMCG00018356 NA coding downstream 182677 9124313 ~ 9130120 (+)
AMCG00018357 NA coding downstream 214545 9156181 ~ 9156453 (+)
AMCG00018355 NA coding downstream 220850 9162486 ~ 9187759 (+)
AMCG00018359 mgrn1 coding downstream 317818 9259454 ~ 9285418 (+)
G115875 NA non-coding upstream 67273 8868542 ~ 8870342 (+)
G115873 NA non-coding upstream 75104 8862081 ~ 8862511 (+)
G115796 NA non-coding upstream 232712 8703157 ~ 8704903 (+)
G115678 NA non-coding upstream 564788 8352077 ~ 8372827 (+)
G115679 NA non-coding upstream 589779 8294416 ~ 8347836 (+)
G115896 NA non-coding downstream 94694 9036330 ~ 9036583 (+)
G115931 NA non-coding downstream 257241 9198877 ~ 9199440 (+)
G115939 NA non-coding downstream 286374 9228010 ~ 9230141 (+)
G115990 NA non-coding downstream 495396 9437032 ~ 9437303 (+)
G116002 NA non-coding downstream 530861 9472497 ~ 9477108 (+)
G115789 NA other upstream 242896 8693364 ~ 8694719 (+)
G115648 NA other upstream 815444 8119778 ~ 8122171 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 1043166 7893627 ~ 7894449 (+)
AMCG00018280 NA other upstream 2190177 6710482 ~ 6747438 (+)
AMCG00018272 NA other upstream 2776999 6155488 ~ 6160616 (+)
AMCG00018358 polr3k,rpc11 other downstream 258021 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 298175 9239811 ~ 9245234 (+)
AMCG00018368 NA other downstream 498021 9439657 ~ 9447144 (+)
AMCG00018369 NA other downstream 539316 9480952 ~ 9486146 (+)
AMCG00018374 NA other downstream 570678 9512314 ~ 9513236 (+)

Expression


Co-expression Network