Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018374 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 9512314 ~ 9513236 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0015671 | oxygen transport | biological_process |
| GO:0005833 | hemoglobin complex | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0005344 | oxygen carrier activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018374 | True | 216 | mRNA | 0.63 | 2 | 9512380 | 9513236 |
| TU145282 | False | 211 | lncRNA | 0.57 | 2 | 9512314 | 9512754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018365 | aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 | coding | upstream | 152628 | 9354703 ~ 9359686 (+) |
| AMCG00018366 | NA | coding | upstream | 216409 | 9291332 ~ 9295905 (+) |
| AMCG00018359 | mgrn1 | coding | upstream | 226896 | 9259454 ~ 9285418 (+) |
| AMCG00018355 | NA | coding | upstream | 324555 | 9162486 ~ 9187759 (+) |
| AMCG00018357 | NA | coding | upstream | 355861 | 9156181 ~ 9156453 (+) |
| AMCG00018373 | NA | coding | downstream | 6431 | 9519667 ~ 9520987 (+) |
| AMCG00018371 | NA | coding | downstream | 32305 | 9545541 ~ 9561135 (+) |
| AMCG00018383 | NA | coding | downstream | 162452 | 9675688 ~ 9685520 (+) |
| AMCG00018395 | NA | coding | downstream | 177590 | 9690826 ~ 9691578 (+) |
| AMCG00018385 | NA | coding | downstream | 195743 | 9708979 ~ 9711300 (+) |
| G116002 | NA | non-coding | upstream | 35206 | 9472497 ~ 9477108 (+) |
| G115990 | NA | non-coding | upstream | 75011 | 9437032 ~ 9437303 (+) |
| G115939 | NA | non-coding | upstream | 282173 | 9228010 ~ 9230141 (+) |
| G115931 | NA | non-coding | upstream | 312874 | 9198877 ~ 9199440 (+) |
| G115896 | NA | non-coding | upstream | 475731 | 9036330 ~ 9036583 (+) |
| G116011 | NA | non-coding | downstream | 14246 | 9527482 ~ 9527757 (+) |
| G116019 | NA | non-coding | downstream | 51490 | 9564726 ~ 9566691 (+) |
| G116020 | NA | non-coding | downstream | 55228 | 9568464 ~ 9569497 (+) |
| G116021 | NA | non-coding | downstream | 56991 | 9570227 ~ 9570461 (+) |
| G116022 | NA | non-coding | downstream | 58014 | 9571250 ~ 9571501 (+) |
| AMCG00018369 | NA | other | upstream | 26168 | 9480952 ~ 9486146 (+) |
| AMCG00018368 | NA | other | upstream | 65170 | 9439657 ~ 9447144 (+) |
| AMCG00018360 | f100a | other | upstream | 267080 | 9239811 ~ 9245234 (+) |
| AMCG00018358 | polr3k,rpc11 | other | upstream | 305538 | 9199657 ~ 9206776 (+) |
| G115789 | NA | other | upstream | 817595 | 8693364 ~ 8694719 (+) |
| AMCG00018372 | LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 | other | downstream | 48825 | 9562061 ~ 9564564 (+) |
| AMCG00018380 | NA | other | downstream | 93425 | 9606661 ~ 9612918 (+) |
| AMCG00018405 | NA | other | downstream | 491037 | 10004273 ~ 10012673 (+) |
| AMCG00018406 | NA | other | downstream | 531216 | 10044452 ~ 10046523 (+) |
| AMCG00018422 | NA | other | downstream | 744569 | 10257805 ~ 10292261 (+) |
