AMCG00018415


Basic Information

Item Value
gene id AMCG00018415
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 10089422 ~ 10094644 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018415
ATGACCTCCTCGGGTGCCACCTCCAACAACAAAGAGTGCAGCACGAGAGGTCAAACTGAAAGGTCAGGCAACACCCATACCTCAAATATGCAGCCTGTGCAGGGCAGCGCCAGAAACCTGACCGCCACGCCGCCTCTGCCTTTTGGCCTCGTTTTTCTGGGCAGTGCGAGACTAAAGAGCACCATGTGGAAGCTGGTTCTACCAGTCCGAGAGGTTTGTCAGGAAGGAATGCGGATTATTTCCACCTGCCTTACAGAAACCTACGCACCGACACTGCTGGCGCTCTGGTCACTTAGAGCTCTGGATGGGGGTTGTCAAGGAAATGGGCGGCTCTCTCAGAGACCAATAAACAATTCACTGCCGATCAGGCGGCTGCTAAAGATCGCCACTCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018415 True 396 mRNA 0.55 3 10089422 10094644

Neighbor

gene id symbol gene type direction distance location
AMCG00018407 NA coding upstream 63932 10015946 ~ 10025490 (+)
AMCG00018396 NA coding upstream 121017 9960221 ~ 9968405 (+)
AMCG00018397 polr3e,LOC106589521 coding upstream 146121 9926956 ~ 9943301 (+)
AMCG00018401 NA coding upstream 163476 9899962 ~ 9925946 (+)
AMCG00018400 NA coding upstream 193995 9882358 ~ 9895427 (+)
AMCG00018412 LOC108437157,LOC107710695,LOC102303741,LOC101486233 coding downstream 6280 10100924 ~ 10120054 (+)
AMCG00018413 NA coding downstream 43336 10137980 ~ 10150773 (+)
AMCG00018414 pms2 coding downstream 56321 10150965 ~ 10159643 (+)
AMCG00018411 NA coding downstream 65820 10160464 ~ 10174296 (+)
AMCG00018425 NA coding downstream 204359 10299003 ~ 10299554 (+)
G116199 NA non-coding upstream 47589 10032553 ~ 10041833 (+)
G116088 NA non-coding upstream 342035 9689765 ~ 9747387 (+)
G116035 dnah3,LOC107561106 non-coding upstream 470517 9618670 ~ 9618905 (+)
G116034 dnah3,LOC108263105 non-coding upstream 475641 9612982 ~ 9613781 (+)
G116028 NA non-coding upstream 510325 9578837 ~ 9579097 (+)
G116214 NA non-coding downstream 25533 10120177 ~ 10121558 (+)
G116264 NA non-coding downstream 120743 10215387 ~ 10216789 (+)
G116300 NA non-coding downstream 250091 10344735 ~ 10345082 (+)
G116301 NA non-coding downstream 256320 10350964 ~ 10351562 (+)
G116302 NA non-coding downstream 261328 10355972 ~ 10357357 (+)
AMCG00018406 NA other upstream 42899 10044452 ~ 10046523 (+)
AMCG00018405 NA other upstream 76749 10004273 ~ 10012673 (+)
AMCG00018380 NA other upstream 476504 9606661 ~ 9612918 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other upstream 524858 9562061 ~ 9564564 (+)
AMCG00018374 NA other upstream 576186 9512314 ~ 9513236 (+)
AMCG00018422 NA other downstream 163161 10257805 ~ 10292261 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other downstream 1157715 11252359 ~ 11256165 (+)
G116585 rbbp6,LOC107689611 other downstream 1871603 11966247 ~ 11970778 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other downstream 2394823 12489467 ~ 12500054 (+)
AMCG00018491 slc5a10 other downstream 2408379 12503023 ~ 12520331 (+)

Expression


Co-expression Network