Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018451 |
| gene name | LOC108432196,LOC105891623,LOC100699516 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 11377899 ~ 11384556 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: hydroxyacylglutathione hydrolase-like protein isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0006750 | glutathione biosynthetic process | biological_process |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0004416 | hydroxyacylglutathione hydrolase activity | molecular_function |
| id | description |
|---|---|
| K01069 | gloB, gloC, HAGH; hydroxyacylglutathione hydrolase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018451 | True | 1318 | mRNA | 0.54 | 9 | 11377899 | 11384556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018450 | LOC106606699 | coding | upstream | 504 | 11371544 ~ 11377395 (+) |
| AMCG00018452 | NA | coding | upstream | 7697 | 11356959 ~ 11370202 (+) |
| AMCG00018454 | LOC107694825,LOC107757004,LOC101474240,LOC102192248 | coding | upstream | 51131 | 11318171 ~ 11326768 (+) |
| AMCG00018453 | NA | coding | upstream | 81053 | 11296349 ~ 11296846 (+) |
| AMCG00018442 | rps2,rs2 | coding | upstream | 168389 | 11203188 ~ 11209510 (+) |
| AMCG00018456 | mlst8 | coding | downstream | 17402 | 11401958 ~ 11408807 (+) |
| AMCG00018463 | e4f1,LOC107758096 | coding | downstream | 43127 | 11427683 ~ 11436200 (+) |
| AMCG00018465 | NA | coding | downstream | 65944 | 11450500 ~ 11452474 (+) |
| AMCG00018462 | grid2ip,LOC108274076,LOC108432200,LOC106589205 | coding | downstream | 103591 | 11488147 ~ 11514342 (+) |
| AMCG00018464 | NA | coding | downstream | 131399 | 11515955 ~ 11526795 (+) |
| G116374 | NA | non-coding | upstream | 294110 | 11061569 ~ 11083789 (+) |
| G116358 | NA | non-coding | upstream | 398214 | 10977022 ~ 10979685 (+) |
| G116354 | NA | non-coding | upstream | 638724 | 10738286 ~ 10739175 (+) |
| G116303 | NA | non-coding | upstream | 1017996 | 10359682 ~ 10359903 (+) |
| G116302 | NA | non-coding | upstream | 1020542 | 10355972 ~ 10357357 (+) |
| G116477 | NA | non-coding | downstream | 26249 | 11410805 ~ 11412070 (+) |
| G116479 | NA | non-coding | downstream | 30925 | 11415481 ~ 11415738 (+) |
| G116546 | NA | non-coding | downstream | 344253 | 11728809 ~ 11818089 (+) |
| G116601 | NA | non-coding | downstream | 741894 | 12126450 ~ 12126699 (+) |
| G116603 | NA | non-coding | downstream | 754446 | 12139002 ~ 12142135 (+) |
| AMCG00018449 | msrb1,LOC107376545,LOC105933050 | other | upstream | 121734 | 11252359 ~ 11256165 (+) |
| AMCG00018422 | NA | other | upstream | 1085638 | 10257805 ~ 10292261 (+) |
| AMCG00018406 | NA | other | upstream | 1331376 | 10044452 ~ 10046523 (+) |
| AMCG00018405 | NA | other | upstream | 1365226 | 10004273 ~ 10012673 (+) |
| AMCG00018380 | NA | other | upstream | 1764981 | 9606661 ~ 9612918 (+) |
| G116585 | rbbp6,LOC107689611 | other | downstream | 581691 | 11966247 ~ 11970778 (+) |
| AMCG00018493 | prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 | other | downstream | 1104911 | 12489467 ~ 12500054 (+) |
| AMCG00018491 | slc5a10 | other | downstream | 1118467 | 12503023 ~ 12520331 (+) |
| AMCG00018498 | NA | other | downstream | 1158989 | 12543545 ~ 12611879 (+) |
| G116832 | NA | other | downstream | 1868787 | 13253343 ~ 13255794 (+) |
