Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018456 |
| gene name | mlst8 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 11401958 ~ 11408807 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| mlst8 | Predicted to be involved in TOR signaling and regulation of actin cytoskeleton organization. Predicted to be located in cytoplasm. Predicted to be part of TORC1 complex and TORC2 complex. Orthologous to human MLST8 (MTOR associated protein, LST8 homolog). |
| description |
|---|
| target of rapamycin complex subunit LST8 |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K08266 | MLST8, GBL; target of rapamycin complex subunit LST8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018456 | True | 1053 | mRNA | 0.59 | 9 | 11401958 | 11408807 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018451 | LOC108432196,LOC105891623,LOC100699516 | coding | upstream | 17402 | 11377899 ~ 11384556 (+) |
| AMCG00018450 | LOC106606699 | coding | upstream | 24563 | 11371544 ~ 11377395 (+) |
| AMCG00018452 | NA | coding | upstream | 31756 | 11356959 ~ 11370202 (+) |
| AMCG00018454 | LOC107694825,LOC107757004,LOC101474240,LOC102192248 | coding | upstream | 75190 | 11318171 ~ 11326768 (+) |
| AMCG00018453 | NA | coding | upstream | 105112 | 11296349 ~ 11296846 (+) |
| AMCG00018463 | e4f1,LOC107758096 | coding | downstream | 18876 | 11427683 ~ 11436200 (+) |
| AMCG00018465 | NA | coding | downstream | 41693 | 11450500 ~ 11452474 (+) |
| AMCG00018462 | grid2ip,LOC108274076,LOC108432200,LOC106589205 | coding | downstream | 79340 | 11488147 ~ 11514342 (+) |
| AMCG00018464 | NA | coding | downstream | 107148 | 11515955 ~ 11526795 (+) |
| AMCG00018468 | NA | coding | downstream | 187114 | 11595921 ~ 11606352 (+) |
| G116374 | NA | non-coding | upstream | 318169 | 11061569 ~ 11083789 (+) |
| G116358 | NA | non-coding | upstream | 422273 | 10977022 ~ 10979685 (+) |
| G116354 | NA | non-coding | upstream | 662783 | 10738286 ~ 10739175 (+) |
| G116303 | NA | non-coding | upstream | 1042055 | 10359682 ~ 10359903 (+) |
| G116302 | NA | non-coding | upstream | 1044601 | 10355972 ~ 10357357 (+) |
| G116477 | NA | non-coding | downstream | 1998 | 11410805 ~ 11412070 (+) |
| G116479 | NA | non-coding | downstream | 6674 | 11415481 ~ 11415738 (+) |
| G116546 | NA | non-coding | downstream | 320002 | 11728809 ~ 11818089 (+) |
| G116601 | NA | non-coding | downstream | 717643 | 12126450 ~ 12126699 (+) |
| G116603 | NA | non-coding | downstream | 730195 | 12139002 ~ 12142135 (+) |
| AMCG00018449 | msrb1,LOC107376545,LOC105933050 | other | upstream | 145793 | 11252359 ~ 11256165 (+) |
| AMCG00018422 | NA | other | upstream | 1109697 | 10257805 ~ 10292261 (+) |
| AMCG00018406 | NA | other | upstream | 1355435 | 10044452 ~ 10046523 (+) |
| AMCG00018405 | NA | other | upstream | 1389285 | 10004273 ~ 10012673 (+) |
| AMCG00018380 | NA | other | upstream | 1789040 | 9606661 ~ 9612918 (+) |
| G116585 | rbbp6,LOC107689611 | other | downstream | 557440 | 11966247 ~ 11970778 (+) |
| AMCG00018493 | prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 | other | downstream | 1080660 | 12489467 ~ 12500054 (+) |
| AMCG00018491 | slc5a10 | other | downstream | 1094216 | 12503023 ~ 12520331 (+) |
| AMCG00018498 | NA | other | downstream | 1134738 | 12543545 ~ 12611879 (+) |
| G116832 | NA | other | downstream | 1844536 | 13253343 ~ 13255794 (+) |
