AMCG00018497 (epn2,LOC107738009,LOC104959799)


Basic Information

Item Value
gene id AMCG00018497
gene name epn2,LOC107738009,LOC104959799
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 12619360 ~ 12648880 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018497
gcgagtgtctgtctgtccgccATGTTGGATTGCGTGGGTGCCACACAGACACGGACGAGTGCGACGGGAGACGCGCACAACGACACAAGCCCCGGCCGCACGCTGGAAAAAGAGCTCCAAATAAGACCACACAATCGCTCTTTTCCTCCTCCGTTAACAGCCAGAAGTTAGGCAGCTGTCTCCCCGGGACGAGGACTAATCCCTCTCCTCACAGAACAGACCTGGTAATGGAGGAACTCAACGCATCGGCTGCCCTCTCTGTGTGGAAATGGTTTTAACAGGTGCTGTACTGGAGACTTAAGGAATACGGCTTTTTGGTGGTGTGGTGGCTGAGAAATAGCACTGTGAACACATTGTGGACTtacctctccccctccccctcccctccccccattttctttttcatttgttttgtaacatcCAATTTTTATCTGTCAAAaacgttaaaaaaaacaaacaccaagaTGCCAAGTTCCTCGATACGGCggcaaatgaaaaacattgtgaaCAATTACTCCGAGGCCGAGAAGAAGGTGAGGGAGGCCACCTCCAATGACCCCTGGGGCCCCTCCAGCTCCCTGATGTCGGAGATCGCAGACCTCACGTACAATGTGGTGGCCTTCTCGGAGATCATGAGCATGATCTGGAAGCGGCTCAACGACCATGGCAAGAACTGGCGCCACGTCTACAAGGCGCTCACCCTGTTGGATTACCTGATCAAGACGGGCTCGGAGCGGGTGGCCCAGCAGTGTAAGGAGAACCTCTTTGCCATCCAGACCCTCAAGGACTTCCAGTACATTGACCGCGATGGCAAGGATCAGGGCATCAACGTGCGCGAGAAGTCCAAGCAACTAGTCTTCCTGCTGAAGGATGATGATCGGCTGAAGGGCGAGCGTTCCCAGGCCCTCAAGACCAAGGAGCGCATGGCCCAGGTGACCACCAGCGTCGGCAGCAGCAACCAGATCAACTTCGGCCGCGGCTCCAGCCAGCCCAACCTCTCCACTAGCTACTCTGAGGAGTACGGCAGGTCCGGAGGCTCCCCTGCCTCCTACCATGGCTCCACATCCCCGCACGCGTCCTCcgagctggagcaggcccggCCACAGACCACTGGTGAGGAGGAGCTGCAGCTCCAACTGGCACTCGCCATGAGCCGTGAGGCAGCAGAGCAGGAGGAGAGGATGCGCCGCGGAGACGACCTCCGGCTGCAGATGGCCTTGGAGGAGAGCCGCAAGGACTCGGGCAAGGGCggcaagaagaagaaagagTCGGCTCTCATGGACCTAATGGATGCCTTGCCTGAAGCAGAGCAGGCCCCAGATCCCTGGGGGGGAGCAGCAGCTGCGGCAGCGGCTGCTTCCGCCCCAGACCCCTGGCAGTCTTATGGTGCTGTTTCTAAACCAGCCATCTCTGTTGATCCATGGGGTTCGTCCTCTGCCTCAGCGACCCCAATGAAGAGCGCTGACCCCTGGGGGTCTCCTGCAAGCTCCACCCCCCTGGCTCAAGCAGCCCCTGATCCCTGGGCATCTGGGCCTGCCAACCGCCCCAAAAACACCACCACAGGCAACTTTGATCCCTTCAGCACACTAAATGGTACTTCCAAGGATGACTTTTCAGACTTCGAGAGTCTGCGTTCATCTTCCATGATGCCAGCGAGTCCAGTTGCGGACCCCACAGGGAAGGTGAATGGTTTTCTTGTTGAAGGTGACGCCCGCGGGAGCTCCTCCTTACCCTCGCGACCCGGCGCGTCCGCCAGTCCTGACCTCTTCGACTCTTCTGGCCTGAGCACCAGTTCTCGCAAAACCCCCGAGTCGTTCCTGGGCCCCAACGCTGCCCTGGTCAACCTGGACTCGCTCGTCACCAAGCCAGCGCAGCCCGCTCCCGTCTCCAACCCCTTCCTCGCTCCAGgagcgCCTCCTCCAGCCCAAGCTCAGGTCAACCCCTTCCAGATCAACCAGCCTCAGCCACCAACTCTAAACCAGATGCGAGTCAGCCCCATGATGGGGATGAGCTCCCAGGGCTTTGGCACCATGCCCTCCATGAGCTTGGAGCCCCTGCCCCTTTCCTCGATGCCTCCGACCGGCTCAGTGGCCATGGTCCCGATGCCAGGAATGGCTGCCCTAGCACCTATGGGTCGGATGATGCCGGGCATGGGGATGGGGATTCCCAGCTCAGTGCCGCAGCCGCTCATGAGCACGGGGATGCCGCCAGCTGCAACCATTGGCCAGGCTGGCAGCACTACCAACCCCTTCCTGCTGTGAGGAGTGCTCTGCGCTGTTCCCATCAGAGACATATGCCTCTATATTAGCTAACAATATAGTGGTCtgttttcagattattattttttccctcttttctgTGGAGTGCTATTTTATTAAGACTTTTGGAGTAGATATGgtgtttacagtttttaattggCAGAAGTTGCTCTCTGCTCCCTTGGAGGTAGGTACCCTGCAGTCATTCATATTTCTCCTAAAATCTCCTGAAATGAAACCTttgtaattactgtgtattgtaAGTGTGATTATCCTCTTACCCTCAAGTACATAACAGCTCACTAAAAGCTGGCATAGTATTTACTGGGGTACCGAGTTTAAACTCTAGATTGCTTTAATCCtatccgttttttttttgttttttttaatgggaatcCTGCTCCGTTTTATTCTGTACTTTAAAGTCTTTAAAGGCAAGATATTCACTAAAGCTAACTTTTTTGCCTCCATTTTAGTTTAATGAAAGTAACCTAACATTCTGCATCACTGcatatacactgtatttacGGTATGCGTTTGTAGACACAGTATAGAGAAAATGAATCAgtttacatttaatgtgtttggTGTTCTAAGCAGGGATTTTGCACAAGCTTTAGTTTTCTGACTGTTGGTTCACCATTAGTCCTTagctaaagaaaaacaatgaccGACTGTTCTCTAAGGAGTGGCATCAGTACCAAGTATCAAATCACACGTGCTGAAGTCTGCGCTCTTACTGCTTAGACCATTCAAGCAGCACCGGGGCTTCTTGTCACGGGTTCCAATCTTGACATATTGGAGGAAGAACTGTTACGAAACGACAGGGAGACAGGTTCACACATTGTGAGGATGGCTTTTCGTTTTGACAAAAGCCATTGTTTTTTTACTGCATACAATCTGGAAAAACCAACATTTGAATTCGGTAAATAGTTTGATTTGAATACTATTGTAAGGCTCACTCTTtgcacagtttttatttttgttagggTGACACCGTTTTATATTGACCGAATTGATAGTCTTTTAAATTCGCATTCAGCTGCCTAGACTCTTAAAATGCTGTTAAAATGAAATCTCCAACAATCGAAGAtttgttgtctttgtgttgATTTTAGATGCTGTTAATTTATATGTAGAAAATGTGTTCATTGTCATAGGAAGAGGGACAAAGGGAAACCGAGggggaaatgcaaatgtgttaaacagATGAGCTTCATATTGCAGCAGGTCTTCTCATGTCTTGCGTCATATCGCCACCTTCACATATAACGGGTGTTAGTGTGATTATAATGCATTGATTCAATTCTAAAGCTTTAAAATCCTGTAGATACTAATCCTCTgatctgaaatgttttatatatatatatatatatatatatatatat

Function

symbol description
epn2 Predicted to enable clathrin binding activity and phospholipid binding activity. Predicted to be involved in endocytosis. Predicted to be located in cytoplasm. Predicted to be part of clathrin vesicle coat. Predicted to be active in endosome and plasma membrane. Orthologous to human EPN2 (epsin 2).

NR:

description
PREDICTED: epsin-2-like

GO: NA

KEGG:

id description
K12471 EPN; epsin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018497 True 3646 mRNA 0.50 9 12619360 12648880

Neighbor

gene id symbol gene type direction distance location
AMCG00018492 NA coding upstream 80093 12530558 ~ 12539267 (+)
AMCG00018487 traf7,LOC107719978,LOC107601260,LOC107590399 coding upstream 306546 12293977 ~ 12312814 (+)
AMCG00018483 NA coding upstream 348733 12235011 ~ 12270627 (+)
AMCG00018482 plk1,LOC102776063 coding upstream 417264 12195542 ~ 12202096 (+)
AMCG00018481 NA coding upstream 432032 12186690 ~ 12187328 (+)
AMCG00018500 NA coding downstream 65227 12714107 ~ 12738068 (+)
AMCG00018501 LOC107376712,LOC106516530,LOC103393184,LOC108242978 coding downstream 135811 12784691 ~ 12819143 (+)
AMCG00018502 cacna1h,LOC108430011 coding downstream 187344 12836224 ~ 12878881 (+)
AMCG00018503 znf598 coding downstream 236307 12885187 ~ 12904501 (+)
AMCG00018507 drg2 coding downstream 285716 12934596 ~ 12943295 (+)
G116667 NA non-coding upstream 299872 12287569 ~ 12319488 (+)
G116654 NA non-coding upstream 340520 12278430 ~ 12278840 (+)
G116653 NA non-coding upstream 345864 12272589 ~ 12273496 (+)
G116603 NA non-coding upstream 477225 12139002 ~ 12142135 (+)
G116601 NA non-coding upstream 492661 12126450 ~ 12126699 (+)
G116725 NA non-coding downstream 51621 12700501 ~ 12700765 (+)
G116728 NA non-coding downstream 230706 12879586 ~ 12883914 (+)
G116765 NA non-coding downstream 256220 12905100 ~ 12958552 (+)
G116769 NA non-coding downstream 284060 12932940 ~ 12934564 (+)
G116775 NA non-coding downstream 398237 13047117 ~ 13048094 (+)
AMCG00018498 NA other upstream 7481 12543545 ~ 12611879 (+)
AMCG00018491 slc5a10 other upstream 99029 12503023 ~ 12520331 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other upstream 119306 12489467 ~ 12500054 (+)
G116585 rbbp6,LOC107689611 other upstream 648582 11966247 ~ 11970778 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other upstream 1363195 11252359 ~ 11256165 (+)
G116832 NA other downstream 604463 13253343 ~ 13255794 (+)
AMCG00018520 slc29a4,LOC107703421,LOC107737679,LOC107581724 other downstream 659018 13307898 ~ 13346877 (+)
AMCG00018537 radil,LOC107725399,LOC107722964,LOC107590699,LOC107564693 other downstream 1349029 13997909 ~ 14022806 (+)
G117033 NA other downstream 1397379 14046259 ~ 14049153 (+)
AMCG00018538 LOC103397138,LOC107554284,LOC100698873 other downstream 1492497 14141377 ~ 14145995 (+)

Expression


Co-expression Network