AMCG00018507 (drg2)


Basic Information

Item Value
gene id AMCG00018507
gene name drg2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 12934596 ~ 12943295 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018507
CGGATGTGAAAGCGCTCCCGCTTCCGCTGGATGATGTCAGCTGCAGATGCATGGGGCACTGGGGCACAGTAACATCTAGAGTATATCACTCTTCTTCCAAATTAATGCGTTTTTCCAATGGAAGtcagcaaaataaacaagtaatttCTTCATCTGTGCAAACGGCACGTGCTTAACACACAGTATATTAAGCAGATCGATTTAAGTGCATTAGCGCAGCCTTTTGGGACATCGACATTTTTCTTATTGGCGTTTATTTCGAAACTTAAATCACTGAAGCTGAGAAAATGGGGATCCTGGAGAAGATATCGGACATCGAGAAGGAGATCGCACGGACGCAGAAAAACAAAGCAACGGAGTACCATCTGGGGTTGCTGAAAGCCAAGCTTGCGAAGTACAGATCCCAGTTGCTGGAGCCCTCCAAATCAGCCGGGGCCAAAGGGGAGGGCTTCGATGTCATGAAATCTGGAGATGCCAGAGTGGCGCTTATCGGGTTCCCCTCTGTGGGAAAGtcCACATTTCTCAGTCTAATGACATCTACTGCCAGTGAAGCTGCCTCTTATGAATTCACAACTTTGACCTGCATCCCTGGTGTTATTGAGTATAAAGGAGCCAACATTCAGCTATTGGATTTGCCTGGTATCATTGAAGGTGCCGCACAAGGAAAGGGTAGAGGGAGGCAAGTCATTGCTGTTGCCAGGACTGCTGATGTTGTCATAATGATGCTGGACGCCACAAAAGGAGATGTTCAGAGGGAATTGTTGGAAAAGGAGTTGGAATCTGTAGGAATTAGACTCAACGTGGCAAAACCTAACATATATTTCAAGCCCAAGAAGGGTGGAGGACTCTCCTACAACTCCACAGTCCCCCTGACCCAGTGCTCTGAAAAACTTGTACAGCTCATTCTACACGAGTACAAAATCTTCAATGCGGAGGTTTTGTTCAGGGAAGACAGCAGTCCTGATGAGTTCATCGATGTGATCGTTGGGAACAGAGTTTACATGCCTTGCTTATATGTGTACAATAAAGTCGATCAAATCTCCATGGAAGAGGTAGACCGTTTGGCCAGAAGACCAAATAGTGTGGTCATCAGCTGTGGAATGAAACTAAATCTAGATTACCTTCTGGAGACGTTGTGGGAGTACCTGGCACTTATCTGCATCTACACAAAGAAGAGAGGAGAGAGGCCAGATTTCACTGACGCAATCATCATGAGGAGAGGAGCTTCTGTAGAACATGTGTGCCATCGAATTCATAGGACGCTAGCAAGCCAGTTCAAGTACGCTCTGGTGTGGGGAACAAGCACAAAGTACAGTCCTCAAAGGGTTGGGCTGACGCACATCATGGAGCACGAAGATGTCATCCAGattgtgaagaaataaatagcATCTGTTTTCACTGATCACCATGCAAACCAGACACAAGTCTTAAAGACTTCTTCAAAAGTGACCATACTCGTGATCCATACTTGggaaatgtgttgctttttttaagCCTATTTACAACACACTCTctatagaaaaaaagaaagctagcagatttttattgtatgtactaaataaacaacacatccATTTATGTGATCCAAATTGAGAAATTCTGTCAATGCTTGAAGTAGCCAGTTTAACTTAGTGTATCCATGCTTGCTCATCAAATGCAATTAAggtaaaagacaaaaacaaatacaacatttaacaATGTAGATTTGCcttctaatttatttagtttacgCTATTCTGGACTTACTATTAAGTACTGCAACCTCTCTGCTTGACATCTTTGATTTTGAGTGAGTAAAATCAGTTTATATAAGGTGTGTTTCAAGATGGTACTAATTTTTGAAGATGTGAAACTAATGTCTCAATGGGTTACTTTATTTTGCTTCCTTTATGACTTCTTGGGACATCTCACATATGACTTCATGAAACATTGACAGGTAAATGTCATGTACCAGCCTGTGATTTGAGAAAGTATAAAATAGGACATCAATGGGAAAATGTGAGAAAATCAAAGGGCaccataataatgattaataattctgtattcatatttaattacgGTCAAATGGGGCGTGGGTGTAATGGGCCGGACATATTgccagaaacaacaacaaccaaagaTAGAATAAAGAAACTAGAACAGATTGCAAGTTTAAAAAGGCCTAGAAGGCAACCACAGAAAAGATGCGAAGATTAAATAAGAATTTGCTGGCGAGACCTGGAAAACAGATGCTGTACATGGAAAGAAGTGGGCATCTTGAAGTCTTCAACCAGAAAATTATAGgtaaaggctgctgctgctgatatagGCCTATAGTGTGTatatctatgtgtgtatgtatatatttgacaCAATGCATCACTTCTCACAAATGTCACGTTATGTAATAAGTGTTctattgtatatatgtacagtactttAACAGAGCACAACATAAAAACTTAGATAAAATGTAAGCCAAGGTGCAATTAAGTCCATACATAAAAGAACAATAATCGTCAACGGCTGCAATATAACGTGTTATTTTTGACGTTCTGAGTTACGTTACCAATGTTGAAATAGGTCTGATTCCAGTTAATGAGTTTGAGGCAATTGCCCCCCATTGCCGGTGTACAACTGTCAGAGATTATAACAAATCTCTTTAACGAAGTGCAGAGTTCAAAGCTTATTCACAAGCTTAACTGTCAGGTTCCAATGTAATCTGTAGTCAGTAATGAAAGTGATTCACAATCCAGGTATTTTATTGTTGGAATATAAAACGCACAGTAAGATTTGGAAAAGGAGCAGATATCTCTTGCAGCCGAACAAGCTCACAGGTTTTCAAACAAGGTAAAACCTCTAATGtatccaatttaatttaataaatatgaaaataaaataattttgcaatGTAGTTGTTTTTGAGCAGGTTAAAAATCTCTTTAACCTgaagtataatgtattatttaaaaatataagtagccaaa

Function

symbol description
drg2 Predicted to enable GTP binding activity. Predicted to be involved in cytoplasmic translation. Predicted to be active in cytoplasm. Orthologous to human DRG2 (developmentally regulated GTP binding protein 2).

NR:

description
PREDICTED: developmentally-regulated GTP-binding protein 2

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG:

id description
K06944 K06944; uncharacterized protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018507 True 2966 mRNA 0.40 13 12934596 12943295

Neighbor

gene id symbol gene type direction distance location
AMCG00018503 znf598 coding upstream 30095 12885187 ~ 12904501 (+)
AMCG00018502 cacna1h,LOC108430011 coding upstream 55715 12836224 ~ 12878881 (+)
AMCG00018501 LOC107376712,LOC106516530,LOC103393184,LOC108242978 coding upstream 115453 12784691 ~ 12819143 (+)
AMCG00018500 NA coding upstream 196528 12714107 ~ 12738068 (+)
AMCG00018497 epn2,LOC107738009,LOC104959799 coding upstream 285716 12619360 ~ 12648880 (+)
AMCG00018508 NA coding downstream 15417 12958712 ~ 13031788 (+)
AMCG00018506 NA coding downstream 89711 13033006 ~ 13043686 (+)
AMCG00018511 NA coding downstream 144166 13087461 ~ 13088726 (+)
AMCG00018510 llgl1,LOC107674688,LOC107592402 coding downstream 157308 13100603 ~ 13123386 (+)
AMCG00018509 NA coding downstream 219362 13162657 ~ 13166145 (+)
G116769 NA non-coding upstream 32 12932940 ~ 12934564 (+)
G116728 NA non-coding upstream 50682 12879586 ~ 12883914 (+)
G116725 NA non-coding upstream 233831 12700501 ~ 12700765 (+)
G116667 NA non-coding upstream 615108 12287569 ~ 12319488 (+)
G116654 NA non-coding upstream 655756 12278430 ~ 12278840 (+)
G116775 NA non-coding downstream 103822 13047117 ~ 13048094 (+)
G116790 NA non-coding downstream 186443 13129738 ~ 13215352 (+)
G116882 NA non-coding downstream 423345 13366640 ~ 13367028 (+)
G116941 NA non-coding downstream 722728 13666023 ~ 13691367 (+)
G116975 NA non-coding downstream 896421 13839716 ~ 13839971 (+)
AMCG00018498 NA other upstream 322717 12543545 ~ 12611879 (+)
AMCG00018491 slc5a10 other upstream 414265 12503023 ~ 12520331 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other upstream 434542 12489467 ~ 12500054 (+)
G116585 rbbp6,LOC107689611 other upstream 963818 11966247 ~ 11970778 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other upstream 1678431 11252359 ~ 11256165 (+)
G116832 NA other downstream 310048 13253343 ~ 13255794 (+)
AMCG00018520 slc29a4,LOC107703421,LOC107737679,LOC107581724 other downstream 364603 13307898 ~ 13346877 (+)
AMCG00018537 radil,LOC107725399,LOC107722964,LOC107590699,LOC107564693 other downstream 1054614 13997909 ~ 14022806 (+)
G117033 NA other downstream 1102964 14046259 ~ 14049153 (+)
AMCG00018538 LOC103397138,LOC107554284,LOC100698873 other downstream 1198082 14141377 ~ 14145995 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G198457 NA non-coding CI01000046 null 4030781 ~ 4031323 (-)