AMCG00018513 (flii,LOC107703428,LOC107674686)


Basic Information

Item Value
gene id AMCG00018513
gene name flii,LOC107703428,LOC107674686
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 13138873 ~ 13159845 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018513
TGGGACTCGGAGCAGCTGTTCGTGTGCGTTAGAGCAACACACCCAGAATAGAGACGAGCCAGACTCGCACTCGGAGATCGCAATGGCTGCCACCGGAGTGCTCCCCTTCATTCGGGGGGTCGACCTCAGTGGAAACGATTTCAAGGGAGGCTACTTTCCTGAGCATGTCAAGTCTATGACTAGTCTACGATGGCTGAAACTCAACAGGACTGGGCTCTGCTATCTTCCAGAGGAACTGGCCTCCCTCCAGAAACTGGAACATTTATCAGTGAGCCACAACAGCTTAACAACGCTGCATGGAGAGCTTTCTAGTCTTCCATGTCTCAGGGCAATTGTGGCCCGAGCTAACAATTTGAAAAACTCAGGCGTTCCAGATGATATTTTTCAGCTAGATGATCTCTCAGTGCTGgaTCTGAGCTACAACCAGCTGAATGAGATCCCTCGGGACCTAGAGAACTCCAAGAACATGTTGGTGTTGAACCTCAGTCACAACAGCATTGACAACATTCCGAATCAGCTGTTCATTAATCTCACGGACCTGCTGTACCTGGATGTGAGCGACAATAAGCTGGACAGCCTGCCCCCTCAGATGAGACGACTGGTTCACTTGCAGACCTTAATTCTCAACAACAATCCTCTGATGCATGCACAGCTTAGACAGCTGCCTGCCATGGTTGCTCTCCAGACTCTCcatttaagaaatacacagcGGACTCAGAGCAATATGCCAACCAGCCTCGAGGGTCTCTCTAATCTAGCAGACATTGACCTGTCCTGCAATGACTTGTCCCGAGTGCCCGAGTGCCTTTACACTCTGTCCAACCTGAAGCGCCTCAATCTGAGTAGCAACCAAATATCCGAGCTCTCTCTGTGTATTGACCAGTGGACACAGATGGAAACCCTGAACCTGTCCAGGAACCAGTTGACATCACTACCTTCTGCTATTTGCAAGTTAACCAAGCTGAAGAAACTGTACCTGAACTCAAACAAGCTTGATTTTGATGGTATCCCATCAGGAGTTGGGAAGTTAGCCAGCCTGGTAGAGTTCATGGCAGCAAACAATAATTTAGAGCTTATCCCTGAAGGGCTGTGTAGgtGTGGGAAACTGAAGAAGCTCGTCCTTAATAAGAATCGTCTTGTGACTTTACCAGAGGCCATCCATTTCCTCACCGATCTTGAGGTCCTTGATGTTCGAGAGAATCCAAACCTAGTGATGCCCCCAAAGCCAGTGGATCGAACGGCTGAGTGGTACAACATTGATTTCTCTCTTCAGAACCAGCTGCGTTTGGCTGGTGCCTCTCCTGCTACTGTAGCAGCCGCAGGAGGAGGAAGTAGTGCCAGAGACCCTCTTGCCAGGAAGATGCGCCTGCGGAGGAGAAAGGACTCGGCACAGGATGACCAGGCCAAGCAGGTCTTGAAGGGCATGACTGATGTGGCCCAGGAAAAGAACAAATCCATTGAGGAGAATGGTGATATGAAATACACGGACCTGAAGACACGGCGCTGGGACAAGAGCCTGGAGAAGCCACAGCTGGATTACTCTGAGTTCTTCTTGGAGGATGTGGGGCAGATCCCTGGGGTCActgtgtggcagatagagaACTTTATCCCTGTGATGGTGGATGAGACTTTCCATGGGAAGTTCTATGAGGCGGATTGCTATATTacttTCCTGGATGAAAACGGCTCCTTGAACTGGCATATCTTTTACTGGATAGGACAAGAAGCCACGCTGGATAAGAAAGCAGGTTCTGCCATCCACTCAGTCAACCTCCGCAACTACCTGGGTGCTGAATGCCGGACCATCCGAGAGGAGATGGGGGACGAGAGTGAAGAATTCAGTGCAGTATTTGACAATGAAATATCTTACATTGAAGGAGGAACCGTCAGTGGTTTCTACACTGTGGAGGATTCCCAATATGTCAccagGCTGTACCGTGTGTATGGCAAGAAGAACATCCGTCTGGAGTCGGTCTCGCTAAAAGCTGCTTCTCTGGACCCGCGCTTTGTGTTTCTGCTCGATAATGGTCTGGAGCTATTTATATGGAGAGGAGCTCAGGCAACCTTGAGTGGTACCACTAAAGCCAGgTTATTTGCTGAGAAGATCAATAAGAATGAGAGAAAGGGCAAAGCAGAGATCACATTGCTGGTTCAGAATCAGGAAACGCCAGAATTTTGGGAGCTGCTGGGAGGCCAGCCAGAGGAAATCAAGAAGAACGTTCCAGATGACTTTACTCCAGTCCGACCTAAACTTTATAAGGTTGGCCTTGGCCTTGGATACCTGGAGCTTCCTCAGATAAACTATAAACTGTCCGTGGAGCACAAGGAGAAAGTAAAGCTTGATGTAGTCCCAGAGCTGAGACTGCTTCAGAGTCTGCTGGACACCAAGGCAGTGTATATCCTGGACTGCTGGTCGGACGTGTTTATTTGGATAGGGCGCAAGTCCCCCCGGCTGGTGAGAGCAGCGGCCCTCAAACTGGGACAGGAGGTGTGCAGCATGTTACACCGGCCCAAACACGCCATGGTCATTCGCAACCTGGAAGGAACCGAGTGCCAGGTGTTTAAATCTAAGTTTAAGAACTGGGATGACGTGCTGAAGGTTGACTACACTAGGAATGCGGAGACGGTGCTGAAGAAAGAGGGCCTGTCAGGGAAGGTGAAGAAGGACGCGGAGCAGAAGGACCAGATGAAGGCTGACCTCACCGCCCTCTTCCTGCCCCGGCAGCCCGCCATGGCTCTCACAGAGGCAGAGCAGATGATGGAGGAGTGGAATGAGGATCTGGATGGGATGGAAGGATTTGTTCTTGAAGGGAAGAAATTTGCACGTTTGCCTGAAGAAGAATTTGGGCATTTCCACACTCAGGACTGTTATGTCTTCCTTTGCCGATACTGGGTGCCTGTGGAGTATGAGGAAGACCAGGAGAAGAAGAGCAAGGACAAGGCTGATGAGGAGGCAGACGATGAGGACAAGCAGCCGGAGGAGGACTTCCAGTGCGTGGTGTACTTCTGGCAGGGTCGTGAGGCCTCCAACATGGGCTGGCTCACCTTCACCTTCAGCCTGCAGAAGAAATTTGAGAGTCTCTTCCCTGGCAAGCTGGAGCAAGAAAACCTGAAGTTTTTGTCACACTTCAAAAGAAAGTTCATCATCCACAAAGGGAAGAGGAAACTGAAGGATGACAACGTGCAGCCCAGCCTGTACCACATCAGGACTAACGGAAGTGCTCTGTGCACCAGGACAATCCAGATTCAAACAGATTCCAGCAACCTCAACTCTGAATTCTGCTTCATCTTAAAGGTGCCCTTTGAGAGTACAGACAACCAGGGCATCGTGTACACATGGGTGGGGCGAGCCGCAGACCCGGATGAAGCGAAGCTAGCAGAAGACATCATGAACACCTTGTTTGATGACACTTACAGCAAACAGGTGATCAATGAAGGCGAGGAGCCCGAGAACTTTTTCTGGGTTGGCATTGGTTCCCAGAAAGCGTACGACGAGGATGCCGACTACATGAAATATGCAAGACTTTTTAGGTGCTCCAATGAGAAGGGGTATTTTTCTGTGTCGGAGAAGTGCTCAGATTTCTGCCAAGATGACCTGGCTGATGATGACATCATGCTTTTGGACAATGGGAAAGAGGTTTACATGTGGGTGGGCACTCAGACAAGTCAGGTGGAGATTAAGCTGAGTCTGAAAGCATGTCAGGTTTACATTCAACACATGAGGTCGAAGGACGCGGAACATCCCCGGAAACTGCGGCTGGTCCGGAAGGGCAACGAGCCCCACAACTTCACCCGCTGCTTCCACGCCTGGAGCACGTTCAAGCAGCCCCTGGTCTAAGAGCTGCCCGGGATTTTGGCCGACTGCAGGGCCCTTGTGCTATAAATTAACCCAGTTAACACTCAGACCGCAACACATGCAATTAGACACAATCCTAGATAGGCTGGGGCTCACATGAATGTTCTGCAATACAGCGTTAAACATTAGCAAAAGAGCTTCTACATATTTTGCTGCCTagatcaaatatattaaaaaagatgTCTATTGAGAATATTGAGGAGTAAAGAATACCATTCGTTACATATAGGAATTGTATCTTTAAGAaggaaatgcatatatttttcaaatgtccaTATCCAAACTCTTTGTTTACAGAATCTTCAGATTAAAATAAGTCTATGTAGAGCTGGATATATACTACATTTTGAATGCATCACTGTTGGGATATGatacaaaaagtaaattaaagttCATATGTGGTTTtggtttataaattaaattgtttttctcACTTAAAATTCTATACTGTTAATATTTGAAATAGGTAAGCTAAGTATAACCCATGGTAATGTAAATTTACAATCTTTCAGGTTTGGTTTTCAGTATTGTAGTCTCCTAACAGTTTACTTTGAATATAAAGTCATACCTTTAAGACGGTGTAATTCTCTACAAATCATATGGCTTTAATAACTATATCTATTGGTCAGCatatgttaattatattaaaaatcagTAGTTTACTTTTCCtttcctgcaaaacaaaaccaaaatgtataTTGCTACATCAAAAAGCTTAACAGAGTCTAGCAggaaacatacataaataagcacAATCTCTCTTATTGGTTGCACAATATATATCTGAGACTCGAACTCCTCTGAAAACACTGCATCAGTGCCACGTATAGTAGAACTGCTTTTTCTTTACAAAGAGGAAATTGTTTTTCCGAGGAGTGCTTTATAATTGTAACAGGCTCTTATCCAGTTTTAGACCCTCAACTTAAAAGCAGTTCCACGGTTAATCGTTTGGCACGATGCTTTTAAACTGTGCCAATCCCGTCTTGCTGGATACATTGTCACCTATAGGATGTTTGTCttttatgtaaaatgcataaCTAAAAAGCTGGGGTAGTAGCTAGGATTTTTATTAAGAGATGAGTACCGGGAATTACAGTAACTGATACTTTTCTATTTGAGATTCAATCTATTGTAATTGGTTTCCAAGTGGTTGCCATGGAACAGCTCAGAATAATGAACTGTTAACAGGTAATATCAGGCTGAGCACCACAAAGAAAGCAACGCAATTATTAAATAAGAGtggaagtttattttttattaatgaatgtgtAACATGGATTCAAAGTACTTTTATTGTTAGATTTGATCAGGTATGGTTTATGTAGTTTAATTTGCTGGAGTCTCAACCCATAGTGCAGTTGGCTTGCTGTAGGTGCAAAactatttttcaattttcatgGACTAAGAGGTTTTGGATTTCACTAATAAGGGATGATGTTTTGTCAACATGTAAATCTATAAAGCATCGTTTCAAAGACACAGTAAAAGGTCACTAGTGCTCTGCTAACCCCCAGTCACAGTTTTGAAAGTGTCTATTATAGAagtgtatgtttatgtaatatTCATCCATagagatggagggggagagatCAATGGGGTATTTAAAAGGGTTAGTCAGGATAGGTGCcaactttaaatattatttgtttttactgttattttactTCTACTTCATATTACGTTTAACTGAATACACAGGCACGCAGACAATAACGGCAGTATATGCAGTTTTACTCTGGTTGATTACCTTGTTGTAGTAAATCTACATATTTCTGTTACTGTGTTTCAATAATTTGTTTAGTGTCCTTCAGAATTAGTTTCCTCAATTCATTATTTGTCTGTGTGACTTCATATCTGAACACCACTAATcaagctgaaatgtttttgctttcctgTTGCCGAGCTGACCTGAGCTTATTTTGCACTTGCCTCTTATACTGTCTGGAGACTATATCACTATATTTGGTTGGTCCTATATTTATGAATTttgtactaaaataaaattgcacaaCACATAATTTGTTgtctttatttcaaaataataaagcaagcTTTGCCATTTACCTCATAGGGCTATAATCTTTTCACTACTGCCATTAATTTGGGATacataaaatgcttttattcctTCCTTGTGTGAACTAAACATCACTTACATCAGTATCATCGCTATTTCCAGAGATTGCTGGAGCATTACTCATCGG

Function

symbol description
flii Predicted to enable actin filament binding activity and phosphatidylinositol-4,5-bisphosphate binding activity. Acts upstream of or within sarcomere organization. Predicted to be active in actin cytoskeleton; cytoplasm; and nucleus. Is expressed in myotome. Orthologous to human FLII (FLII actin remodeling protein).

NR:

description
PREDICTED: protein flightless-1 homolog

GO:

id name namespace
GO:0045214 sarcomere organization biological_process
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018513 True 6060 mRNA 0.44 30 13138873 13159845

Neighbor

gene id symbol gene type direction distance location
AMCG00018504 LOC107592748 coding downstream 204435 12929748 ~ 12934438 (-)
AMCG00018505 NA coding downstream 215406 12914014 ~ 12923467 (-)
AMCG00018499 b9d1,LOC107737762,LOC107674617 coding downstream 483634 12648878 ~ 12655239 (-)
AMCG00018496 NA coding downstream 564361 12570888 ~ 12574512 (-)
AMCG00018495 NA coding downstream 585475 12544940 ~ 12553398 (-)
AMCG00018512 LOC107674657,LOC107592418,LOC107737959 coding upstream 512 13160357 ~ 13187749 (-)
AMCG00018519 NA coding upstream 43848 13203693 ~ 13212595 (-)
AMCG00018517 shmt1,LOC107674655,LOC107581728,LOC107737723,LOC107720052,LOC108257064 coding upstream 54747 13214592 ~ 13223710 (-)
AMCG00018518 NA coding upstream 67306 13227151 ~ 13234684 (-)
AMCG00018521 NA coding upstream 78965 13238810 ~ 13245731 (-)
G116784 NA non-coding downstream 92280 12989436 ~ 13046593 (-)
G116750 NA non-coding downstream 254451 12879665 ~ 12884422 (-)
G116749 NA non-coding downstream 262110 12874915 ~ 12876763 (-)
G116672 NA non-coding downstream 840162 12295461 ~ 12298711 (-)
G116619 NA non-coding downstream 1018266 12119808 ~ 12120607 (-)
G116875 slc29a4,LOC108430547,LOC107104199 non-coding upstream 171046 13330891 ~ 13342748 (-)
G116883 NA non-coding upstream 206729 13366574 ~ 13367055 (-)
G116918 NA non-coding upstream 340873 13500718 ~ 13502497 (-)
G116931 NA non-coding upstream 368851 13528696 ~ 13534836 (-)
G116949 NA non-coding upstream 460378 13620223 ~ 13620432 (-)
AMCG00018490 NA other downstream 848329 12287568 ~ 12290544 (-)
G116577 NA other downstream 1227537 11911014 ~ 11911336 (-)
G116428 NA other downstream 1935985 11199578 ~ 11202888 (-)
AMCG00018440 NA other downstream 1991933 11088174 ~ 11146940 (-)
AMCG00018437 srebf1,LOC107713935 other downstream 2055093 11061628 ~ 11083780 (-)
AMCG00018522 NA other upstream 93240 13253085 ~ 13257250 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other upstream 485523 13645368 ~ 13727870 (-)
AMCG00018555 LOC107689851 other upstream 1082700 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 1343558 14503403 ~ 14520875 (-)
G117377 NA other upstream 1576293 14736138 ~ 14738312 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026661 flii coding NC_007114.7 CM002887.2 40206031 ~ 40232615 (-)
grasscarp (Ctenopharyngodon idella) CI01000046_03982069_03996142 FLII, FLII.S coding CI01000046 null 3982069 ~ 3997163 (+)