AMCG00018519


Basic Information

Item Value
gene id AMCG00018519
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 13203693 ~ 13212595 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018519
CCGCTCCCGCAGTGGCGACGTCGAGACAGCGCGCAAAaatttaaagaagaagaagaagaaggtaGAGAGACTGCAGCAGGCCTGATGAAGACACAAATTAGTGTGGTTTCCGCTGTACAAGCTTTAAAACCCAAAGCGATGGAGGAAGGAGAAAGTGTCATCGTGATCAGTGACGATGAAGAAATGGCTACAGGGTGTTTTGACGATTCCTCTGTGATGATTTTAGATGAGACTTCTGAGAAAAACGATTCTTTGTTAGACTCGAACAAAACAAATGAGTTGGTGGATGAGGAGCTGTCAATCACTTATTCTAAAAGGCCAGAGGTGATGCCACATGCACGATATGATTGCACAACAAATCTGTTCAGcCAAACTGAGAATGAGACTAAGGTTCCTATTGAAAGAAACAGCACCTTCTGTCAAAAGTGTTACTGTTACATCTGTGATAACCTAGCGTCCAAGtgtccGGTCTGGACCACCACTGGATACTGTCACTGCAATGCCCACAAGCGCAGCACATTCTGGAAAGCATGGAGAGATAAGACTGTGTTGGGAGGCCTGGAGATGTTTAAATTTGATCTGCTGGAGATAGATGCTGACCTTAGACAAGCTGAATATAACCTTTTCAAGTTTGAAGCTGAATTGTCAGTAGAGCATGGCAACTTTCTGATGGGGTATGTGACCCCTTTGACCAATATCTACCCTTGCTTATGCAGATGCCATGTAAGCTACTCAAAGAACAGTGCATGCAGTCACTGCATTGCAAAACATGTGGAAGTGCTGCTATATGActATTCCAAAGTGTTTGACCTTCTGTCGTCCTTCCTCGATAAAGCAGACAAAGAGCGACCAAAAACCGCTGCTGTGATGTTGCTAGGAGCAGCAAAGCACATTGCAACTCACAAGCAGCCTTCCAGCCTTCGCttaccaagaaataataatcttaaagCACATGTGACAGAAGCCCTTCCTTTGTTACTATTAAGTCTGAATATCATTCAGTGGGATGATCCTTTATTGATGGCTGTTCTGAGGGGACAGAATGTCTCCGGGGAGCGATTCGTGAAAGGAAAGCGAGAGACGCTATGTGAACTGATCCAGGTGGTGCAGGCGCGTGTGGAGAAACTCAGGGAGCAAAAGAAGTACAGGGAGCTGGCCCGATATCTCAAGGTGgtgaaaagcaataataaaatgcatttgcaaAGCATGAGGGATTACATCCCCTTCTTCCTGTGCAAGGCTGGAGATTTTCAGGCTGCGAGTCAGAGTTTTTTCCACTATACATCTTTATTTTGCTGCTGCGCTTGTCGACTGACACCCACCCAGTTTACTACGTACCTGAAGATCCTTCGAAGGGGGCAAGTCCCTGTTGGGAAAGAACCTTTTCTTTCAACGGAGTGGGAGCCCATCAAAGGTGCTAACCCTCTAACAAAGAGCGAGCTTATAAAGTGTGGCCTTAAAATACTTTACTACAACTCCCAAGTGTACATGCATCCGGACAGCTGGGCAGATTTCGTCCAACTAGCTTGCAGCTCAGCAGATTTGACGGAAGACGGCTCTTTGATTTGTGTGCCTTGGCAAGAACCAGAGGAGACATTTCAGCAGAAAACCAGAGACATTGCCAGTGCTATTCTCATGGAACTGGAAGTGAAACGGACCCTCAGTATCCCACGACAGTTTCACATTCATCTGCACAACCAGGCTCTGCTGTTACTGGTGACCCAGGCGCTGGCTTGCAGACTGCTCCGCACTAGCATGCTCACTCTGCTCAATGTGGTGATGGCTTTCAAGGTAGCAACTTTTGACATGCTTGCTCTATGGTTCATGATAGACGCATGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04115 p53 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018519 True 1839 mRNA 0.46 15 13203693 13212595

Neighbor

gene id symbol gene type direction distance location
AMCG00018512 LOC107674657,LOC107592418,LOC107737959 coding downstream 15944 13160357 ~ 13187749 (-)
AMCG00018513 flii,LOC107703428,LOC107674686 coding downstream 43848 13138873 ~ 13159845 (-)
AMCG00018504 LOC107592748 coding downstream 269255 12929748 ~ 12934438 (-)
AMCG00018505 NA coding downstream 280226 12914014 ~ 12923467 (-)
AMCG00018499 b9d1,LOC107737762,LOC107674617 coding downstream 548454 12648878 ~ 12655239 (-)
AMCG00018517 shmt1,LOC107674655,LOC107581728,LOC107737723,LOC107720052,LOC108257064 coding upstream 1997 13214592 ~ 13223710 (-)
AMCG00018518 NA coding upstream 14556 13227151 ~ 13234684 (-)
AMCG00018521 NA coding upstream 26215 13238810 ~ 13245731 (-)
AMCG00018524 NA coding upstream 359771 13572366 ~ 13578310 (-)
AMCG00018525 actb,LOC102799139,LOC103365100,LOC102299797 coding upstream 370509 13583104 ~ 13587070 (-)
G116784 NA non-coding downstream 157100 12989436 ~ 13046593 (-)
G116750 NA non-coding downstream 319271 12879665 ~ 12884422 (-)
G116749 NA non-coding downstream 326930 12874915 ~ 12876763 (-)
G116672 NA non-coding downstream 904982 12295461 ~ 12298711 (-)
G116619 NA non-coding downstream 1083086 12119808 ~ 12120607 (-)
G116875 slc29a4,LOC108430547,LOC107104199 non-coding upstream 118296 13330891 ~ 13342748 (-)
G116883 NA non-coding upstream 153979 13366574 ~ 13367055 (-)
G116918 NA non-coding upstream 288123 13500718 ~ 13502497 (-)
G116931 NA non-coding upstream 316101 13528696 ~ 13534836 (-)
G116949 NA non-coding upstream 407628 13620223 ~ 13620432 (-)
AMCG00018490 NA other downstream 913149 12287568 ~ 12290544 (-)
G116577 NA other downstream 1292357 11911014 ~ 11911336 (-)
G116428 NA other downstream 2000805 11199578 ~ 11202888 (-)
AMCG00018440 NA other downstream 2056753 11088174 ~ 11146940 (-)
AMCG00018437 srebf1,LOC107713935 other downstream 2119913 11061628 ~ 11083780 (-)
AMCG00018522 NA other upstream 40490 13253085 ~ 13257250 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other upstream 432773 13645368 ~ 13727870 (-)
AMCG00018555 LOC107689851 other upstream 1029950 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 1290808 14503403 ~ 14520875 (-)
G117377 NA other upstream 1523543 14736138 ~ 14738312 (-)

Expression


Co-expression Network