AMCG00018529


Basic Information

Item Value
gene id AMCG00018529
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 13743989 ~ 13745104 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018529
ATGGAAAGAAGCGAAGGTGTCCAGATCCCCTGGGGCCGGGTGAACTCCTCTCCCTTCCCCAACTCTTCAGAGCTGTCGCCATCCTCCGGTTCCTTCAACGAGATCCTTGTCACCTCCTTGCTTGGGACCATCCTGACGGTCATGTGTCTGATTGGGGTGGTCGGCAATGTCTACACTCTGGTCGTGATGAACATTTCCGTAAGAGTGACCGGCTCCATGTACGTGTACATCGTCAATTTAGCCCTGGCGGACTTGCTCTATCTGTCCACCATCCCCTTTGTCGTGTGCACCTATTTTGTCAAGGACTGGTACTTCGGTGACATCGGATGCCGGATCCTCTTCAGTCTGGACTTCCTCACCATGCATGCCAGCATTTTCATCCTCACCATCATGAGCACCGAGCGGTACCTGGCAGTGGTGAAGCCTCTGGACACCGTGGGCAGGTCCAGGCACTACCGGAGGACAGTGACCTGCGCGGTGTGGCTGGTGTCCTTCCTGCTCGCTCTCCCGACTATGATCATGATTGATTTGAAGACCACCCTTCAGGACGGGGTGGAAACGCGCATGTGCCACCCCACTTGGCAGATGAAAGCGTATAAGGTGTACTTGATCGTCCTGTTCAATACTTGCATCTTGGCTCCGGGCTTCATCATTGGCTACCTGTATGTCAAATTAGCCAGGACTTACTGGATGTCTCAGACCACAGTGTTCACTACAAAAGAGATGAATCAGTGTCCCAAGCAGAAGGTGCTTTACATGATCCTCAGCATCGTCATCACCTACTGGGCTTGCTTCTTGCCGTTTTGGTTGTGGCAGTTGCTAAGCATGTACTACTTTGGCCCTGGCCACCTTTCACAAAAGACAATGGTGTATGTGAATTTCACCGTGACCTGTCTGGCCTATAGCAACAGCTGCATAAACCCCTTTCTGTACACCCTGCTCACCAAGAACTACAAGGAGTATGTAAAGGGCCGGCCGAAGAGGGGTATAGGTTTCAAGAGGAGGTTCAATAGTCGATCGTCGCAAAGATCGGTGTCCTCTGGGAGCCACCAGTACACGGACACCCTGACCATCGCACACATGAAAGGGGTCACGGAGGAAGCCTGCAATGTTTGA

Function

GO:

id name namespace
GO:0065008 regulation of biological quality biological_process
GO:0008015 blood circulation biological_process
GO:0007165 signal transduction biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018529 True 1116 mRNA 0.53 1 13743989 13745104

Neighbor

gene id symbol gene type direction distance location
AMCG00018525 actb,LOC102799139,LOC103365100,LOC102299797 coding downstream 156919 13583104 ~ 13587070 (-)
AMCG00018524 NA coding downstream 165679 13572366 ~ 13578310 (-)
AMCG00018521 NA coding downstream 498258 13238810 ~ 13245731 (-)
AMCG00018518 NA coding downstream 509305 13227151 ~ 13234684 (-)
AMCG00018517 shmt1,LOC107674655,LOC107581728,LOC107737723,LOC107720052,LOC108257064 coding downstream 520279 13214592 ~ 13223710 (-)
AMCG00018531 smurf1,LOC107720062,LOC107591759,LOC107703417,LOC107581717 coding upstream 38749 13783853 ~ 13832385 (-)
AMCG00018532 NA coding upstream 106307 13851411 ~ 13857590 (-)
AMCG00018535 wipi2,LOC107720064 coding upstream 158515 13903619 ~ 13915955 (-)
AMCG00018546 NA coding upstream 275951 14021055 ~ 14036632 (-)
AMCG00018545 NA coding upstream 296537 14041641 ~ 14063120 (-)
G116949 NA non-coding downstream 123557 13620223 ~ 13620432 (-)
G116931 NA non-coding downstream 209153 13528696 ~ 13534836 (-)
G116918 NA non-coding downstream 241492 13500718 ~ 13502497 (-)
G116883 NA non-coding downstream 376934 13366574 ~ 13367055 (-)
G116875 slc29a4,LOC108430547,LOC107104199 non-coding downstream 401241 13330891 ~ 13342748 (-)
G117011 arpc1a,LOC107388895,LOC107674705,LOC107703414 non-coding upstream 141205 13886309 ~ 13887367 (-)
G117012 arpc1a,LOC102781765 non-coding upstream 142317 13887421 ~ 13890103 (-)
G117015 arpc1b non-coding upstream 152396 13897500 ~ 13966269 (-)
G117066 NA non-coding upstream 350187 14095291 ~ 14100107 (-)
G117122 NA non-coding upstream 487692 14232796 ~ 14233624 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 16119 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 486739 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 1453445 12287568 ~ 12290544 (-)
G116577 NA other downstream 1832653 11911014 ~ 11911336 (-)
G116428 NA other downstream 2541101 11199578 ~ 11202888 (-)
AMCG00018555 LOC107689851 other upstream 497441 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 758299 14503403 ~ 14520875 (-)
G117377 NA other upstream 991034 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 1753558 15498662 ~ 15518315 (-)
G117784 NA other upstream 3263794 17008898 ~ 17009301 (-)

Expression


Co-expression Network