AMCG00018556


Basic Information

Item Value
gene id AMCG00018556
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14205321 ~ 14206123 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018556
ATGATCAGTTGCGTCCAGCCATCCCGCAATCCGCTGGACTACAATGACTATGGCTGCTGGTGTGGCTTTGGGGGGAAGGGGCCCCCCGTGGACACTCTGCCCGCCTGTCGCCCCCTGGTGGACATATCCTACATCAAACTGTACAACTACAGCTGCAACGCACAGGTGGTCTCCTGCACCAGCTCCAATGATGAGTGCCAGGCGGCCGTGTGCGAGTGTGACCGAGCCGCCGCCCACTGCTTTGCCCTTGCGACCTACGACCCCAGCAACAAGAACCTAGACAAACGGCAGCGCTGCACTGCCTGA

Function

GO: NA

KEGG:

id description
K01047 PLA2G, SPLA2; secretory phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018556 True 306 mRNA 0.61 3 14205321 14206123

Neighbor

gene id symbol gene type direction distance location
AMCG00018557 NA coding downstream 3034 14201096 ~ 14202287 (-)
AMCG00018544 LOC107658624 coding downstream 21030 14182493 ~ 14184291 (-)
AMCG00018543 NA coding downstream 27009 14174101 ~ 14178312 (-)
AMCG00018542 NA coding downstream 32430 14161989 ~ 14172891 (-)
AMCG00018541 tfip11,LOC102785266 coding downstream 46969 14153523 ~ 14158352 (-)
AMCG00018554 msi1,LOC100704609 coding upstream 2313 14208436 ~ 14223317 (-)
AMCG00018560 NA coding upstream 59972 14266095 ~ 14288995 (-)
AMCG00018561 grk3,LOC107689528,LOC107758628 coding upstream 87095 14293218 ~ 14316293 (-)
AMCG00018563 NA coding upstream 115208 14321331 ~ 14328617 (-)
AMCG00018559 NA coding upstream 126669 14332792 ~ 14359292 (-)
G117066 NA non-coding downstream 105214 14095291 ~ 14100107 (-)
G117015 arpc1b non-coding downstream 239052 13897500 ~ 13966269 (-)
G117012 arpc1a,LOC102781765 non-coding downstream 315218 13887421 ~ 13890103 (-)
G117011 arpc1a,LOC107388895,LOC107674705,LOC107703414 non-coding downstream 317954 13886309 ~ 13887367 (-)
G116949 NA non-coding downstream 584889 13620223 ~ 13620432 (-)
G117122 NA non-coding upstream 26673 14232796 ~ 14233624 (-)
G117221 NA non-coding upstream 106135 14312258 ~ 14399555 (-)
G117223 NA non-coding upstream 115962 14322085 ~ 14408949 (-)
G117227 NA non-coding upstream 151312 14357435 ~ 14402346 (-)
G117234 NA non-coding upstream 160342 14366465 ~ 14367911 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 477451 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 948071 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 1914777 12287568 ~ 12290544 (-)
G116577 NA other downstream 2293985 11911014 ~ 11911336 (-)
G116428 NA other downstream 3002433 11199578 ~ 11202888 (-)
AMCG00018555 LOC107689851 other upstream 36422 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 297280 14503403 ~ 14520875 (-)
G117377 NA other upstream 530015 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 1292539 15498662 ~ 15518315 (-)
G117784 NA other upstream 2802775 17008898 ~ 17009301 (-)

Expression


Co-expression Network