AMCG00018557


Basic Information

Item Value
gene id AMCG00018557
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14201096 ~ 14202287 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018557
ATGAAGACCCTGCTGATCTTGAGCGCCGTGCTGTGTGCTGTGCTATGTGATAACCAACGTGCTCTGTGGCAGTTCAGGAATATGATCCTGTGTGTGATGCCCTCCAGCTGGCCGGCCTTCGACTTCGCTGACTATGGCTGCTACTGCGGGCTGGGCGGCTCGGGCACACCTATCTACTCCTACACCTGCGATGACCCCAACGACATCATCACCTGTTCAGagaACAATGACCCGTGTGAGAAGTTTATCTGTGAGTGTGACCGACAGGCGGCCTTATGCTTCAGCACTGCAGGGTACAGCGAGGAGAACAAGAACCTGCCCAGTGACCGCTGCAAGTGA

Function

GO: NA

KEGG:

id description
K01047 PLA2G, SPLA2; secretory phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018557 True 339 mRNA 0.56 4 14201096 14202287

Neighbor

gene id symbol gene type direction distance location
AMCG00018544 LOC107658624 coding downstream 16805 14182493 ~ 14184291 (-)
AMCG00018543 NA coding downstream 22784 14174101 ~ 14178312 (-)
AMCG00018542 NA coding downstream 28205 14161989 ~ 14172891 (-)
AMCG00018541 tfip11,LOC102785266 coding downstream 42744 14153523 ~ 14158352 (-)
AMCG00018540 LOC103397138,LOC107554284,LOC100698873 coding downstream 48710 14143176 ~ 14152386 (-)
AMCG00018556 NA coding upstream 3034 14205321 ~ 14206123 (-)
AMCG00018554 msi1,LOC100704609 coding upstream 6149 14208436 ~ 14223317 (-)
AMCG00018560 NA coding upstream 63808 14266095 ~ 14288995 (-)
AMCG00018561 grk3,LOC107689528,LOC107758628 coding upstream 90931 14293218 ~ 14316293 (-)
AMCG00018563 NA coding upstream 119044 14321331 ~ 14328617 (-)
G117066 NA non-coding downstream 100989 14095291 ~ 14100107 (-)
G117015 arpc1b non-coding downstream 234827 13897500 ~ 13966269 (-)
G117012 arpc1a,LOC102781765 non-coding downstream 310993 13887421 ~ 13890103 (-)
G117011 arpc1a,LOC107388895,LOC107674705,LOC107703414 non-coding downstream 313729 13886309 ~ 13887367 (-)
G116949 NA non-coding downstream 580664 13620223 ~ 13620432 (-)
G117122 NA non-coding upstream 30509 14232796 ~ 14233624 (-)
G117221 NA non-coding upstream 109971 14312258 ~ 14399555 (-)
G117223 NA non-coding upstream 119798 14322085 ~ 14408949 (-)
G117227 NA non-coding upstream 155148 14357435 ~ 14402346 (-)
G117234 NA non-coding upstream 164178 14366465 ~ 14367911 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 473226 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 943846 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 1910552 12287568 ~ 12290544 (-)
G116577 NA other downstream 2289760 11911014 ~ 11911336 (-)
G116428 NA other downstream 2998208 11199578 ~ 11202888 (-)
AMCG00018555 LOC107689851 other upstream 40258 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 301116 14503403 ~ 14520875 (-)
G117377 NA other upstream 533851 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 1296375 15498662 ~ 15518315 (-)
G117784 NA other upstream 2806611 17008898 ~ 17009301 (-)

Expression


Co-expression Network