AMCG00018560


Basic Information

Item Value
gene id AMCG00018560
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14266095 ~ 14288995 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018560
cagacagacaggtgttGCCTTACTGGGCAGTGCAGCTCTAGTGCAGGCTAGTTATTAATAGCTCTAGTCTTGTGTTAACCCAGCTGCCTCCCTTATCAGCGCTGGGAGAGAGAAGGATTGGGAGGGGGGATACTgtgtgagtgagggagagaagagagggggTCAGACATACTATTTCTGTACGTCCCACTGCCCCACACTGTTCCCGTCTCACTCTGTGTTCACGAGCGCGTCTTGTTTTtgcgtctgtctgtccgtccgtccTGGAGAGACCGGGACAGAGCTTCGGCCTCTTCACGCCTCAGAACAAAGCAGAAGAAGGAAGAAACAAGTAAGAGACCGAAGGAAAGGAGAGAGCGTGAAATCCACAGGGTTTATAAGTGTGTCCCAGTGGCTGATTTCCCAGGACTTCCCAGACAAGatCCAGGAGGAGAAGAAGCCCCCCCCCCAGGCAGAACCACCTCCCCCCACAACAGCCGTGCCAGGGGGCTTCCTGAAGCAGCTGGTGCGACAGACAGAGCAGGAGGCCAGAGAGGCGCGCAGTCGTGACCCGGAGCCCCGAGAGGAGAGAGTGCCCAGCAAGCTCAGTGACAACCTGGTCCTGCCCTTCCTGCTGCCCCCAGAGGAGGCCACGTCCCCAGAGCCGGAGATGTCACATCCAGCCCAGCTATTGGTCAACGGTGTTCACGGCAGTGGAGAGGGCCATCTCCAGAATGTGGGAGTTGCCAAGAAACCGTCCCGGAGGCTGATGTCACCGGAGCCAGGAGGGGGATCTGGCCAATCAATGGAACAGCCCAAACAGGAAGCCACTCCCCCCGGCAAACAGGATGTGGCCCCTGTAACCACGGAGACAAAGAAGGGAGACAGGCGTGGGGGGAGGcatgggggagagagggaagaggggaGAAGTGCAGaagaggagagtgagagagaggagaagacaGGAGGACAGAAGGAGGAGAGGCAGGAGCCAGAGGGACAGACGGCAGAGTGCAGTAATGTGGAGCAGaggGATGTGTGGTATGAGGCAGGACCCGTGTGGTATGTGCACAAGGACGGATTCACTATGGCTATGCAGCTGAAGCCGGACGTGGGGACCCCTGAGCTGCCTGAGGGGACAGTGAGGGTCAGACTGGACAGCACCGGTGCTCTGCTGGACGTCCAGGAGGACGAGATTGAGAGGgtgAACCCCCCGGAGCAGTCATTGCTGGAGGAGCTGAGTGGACTGTCCAGTGTAAACGAGGCCACTGTAGTCCACACGCTGACCGCCCGCAGTCTGGCCCAGCATCACCTCACCCTGACTGGCCCCCACGCTATTGCCCTGCGCCCTCCTTCTGCCCTCCTGGGCAAGGGCCTGGCGGGAGGCGGTGAGCAGGGGGCGGTACTGCGGGCACTGTGTGGTAGGCTGTGGGCCGGGGTGCTGCGGCAGCGCAAGGACAGGGCCGTGGTGACAGTGGGACGCAGTGGGGCGGGCAAGACCTCCTGTTGCCAGGCCATCGCtctggagctgctgcagcaggCGGGCACTGAGGGCATTGTGACtgGGGAGAAGCTGCAGGCTGTGTTCACGGTGCTCCGGTCATTTGGGAGTGTGAGCTCACGTCACAGCCCCGCCTCCTCCCGTGTCTCCACTGTGATCTCCCTTGACTACAGCCACAGGGGCAAGGTGGCTGGTGCCCACCTGCAGaccatGTTACTGGAGCGCTGGAGACTGAGCTGCCGGCCGGAGGGAGAGAGCAGCTTCCTTGTCTTCAGAGAGATGCTGGGGGGACTGAACCCGGAGCTGaggacagAGCTGCAGTTACATCAGCTGGTGGAGGACAACCTGTTTGGAATCTCCCCTCCAGTGAAGATGGAGGAGAAGCAGAAGGCCTCCGCAGCATTTGGCAGGCTACTGGCTGCCATGGAAATGCTGGGCTTCTCAGCCAATGAGCAGCGAGCAATCTGGCACGTGCTCGCTGGGATATACCATTTGGGAGTAGCAGGGGCCTGCAAAGTGGGCCGGCGTCAGTTCCTGCGCTGGGACAGTGCTCAGTGCTGTGCGGGGGCTCTGGGCTGTGACGGCGAGGAGCTCTCCACCGCTGTCTTCAAGCACCACCTCCTGCACCTGCTGCAGCAAGCCACTGGGGGCGCCAGGGAGCGCCACTGCGACACACCCAGCGACACTGGACCCCGGATCTCCGCAGCGCAGTGTGTGGAGGGGATGGCTGCAGGCCTGTATGAAGAGCTCTTCTGCACTGTAGTCTCTCTCATCAACAGATCGTTGTGCTCAGAGCAGCTGACCCTGGCCTCCATCACGCTGGTGGATACCCCAGGTTTCCAGAACCCTCGTCACAGTGGGGAGGAGCGGGCAGGCGGGCTGGCCGAGCTGTGCCACAACTACCTACAGGAGAGACTGCTGGAGCTCTGCCACCAGCACACTTTCACTGAAGCCCTGCACAGATACAAGCAGGAGGGGGTCAGTGTGGACTTCGAGGTTCCAGAGTCCAGCCCATCCCAGGTGGTCTCAGCCATTGACCAGGCAGCCCTGCAGGTGCGGTCAGCGGAGGGCGCTGCGCGGGGACTGCTGTGGGTGCTGGATGAGGAAGTGTTGACCCCCGGATCCACTGAGGCCATTGTACTGGACAGAGTGTGTGCCCACTATCCTGAAACAGtgcgtcagtgtgaGCAGCCTCTGCAGTGTGAAGTGTCTCATCTGCTGGGATCTGACCCGGTCCGGTACGACCTGAGTGGCTGGTTCGGTCTTGTTCAGAACAACCCATCTGCCCTCAGTGCCGGTGCTCTGCTGCAGGGCTCCAACCTggcagtAGTACGCAGTCTGTTTGCCCCTCGCTCTGCAGTGCCACCGCTATGCCGAGGGCTTGGGGGGCTGGAGGTGGGGACCCAGCGATCGCTGCAGAGGGCCGGCACAGTCAGGAAGACCTTCAGTGGGGGACTGGCAGCCCTAAGGAGACGGTCAGCCTGTATCACTGTCAAACTGCAGGCGgaTGCTCTGATTAACCTGGTCCGCCGCTGCTCTCCAGTGTtcctgcactgtgtgtgtgcacggGGGGAAGGGGGCGCAGGGGCGGCCGCAGGGGCAGGCTTCGACATCCCCTCTCTCCGCACGCAGCTCCGctccacaaacacactgcacatACTGCAACTGCACAgaacagGTTATCCTGATCATATGTCTCTCAGCGATTTTCGTCTGCGGTTCCAGGCGCTCTCTTCCCCCGTGATGAAGAGATACGGCTCTGTCTTCATCACCCCCGATGAAAGGAAGgcAGTGGAGGAGTTATTGATAGATCTGGACGTGGAGAAGAAAAGTATAGTTGTGGGTCAGAGCCGGGTTTTCATGAAAAAAGGTGTCCTGTCCTCATTGGAGGAGCAGAGGGAGAAGCTGGTCTCTGATTGGCTGGTGCTGCTGCAGGCGGCCTGCTGGGGTCACCTGGCCCGACAGCGCTACCGTCGTATGAAGGTGGTGGAGCTGGCCGTGTGCTGTGTGCAGAGGAATGTGCGCATGCTGTATACCGTTCGGCAGTGGGGCTGGTGGAAGCTGCTGTGCAGAGTACGCCCCCTGCTGGACGTCAACATCGATGACCACCGATACAGAGTCAAGGAGgaggaGGTCAGCGCTCTGAGGAGGAAGCTGCAGAagtcagagagggagaggaatgaGTTGAGGCAGAGCGCCGACGCACTGGAGACCAAGGTGACAGCGCTGACCTCTGAGTTGAGTGATGAGCGTTTCCGTGGCGACGCGGTGTGCCAGGCGCTGGACTCTGAGCGGGCAGAGAGGTTGCGACTGGCCAGAGACAATGTAGAGCtgcagGCAAGGCTGCAGCAGGCCCAGCACAGGCTTGAGGAGGTGGAGCAGCAGCTGGCAGAGGCGCGGCAGGAAGTCAAGAACCGAGAGCTGGAGGCAGCCGGCAGCGAGGGCACCGCGGGCACTGAGAGCGAGTGGACGCTGCGGCTGGACTGCGCGCAGACTGAGATTGACTTCCTGCGCCGCCGCCTGCGCCACAGCGACGAGAGACTGGAGAGCGAGCAGGAGGCGCGGAGAGAGCTGGACACCAAGCTGAGTGAGCTACAGTGTCAGCTGGACGAGTCCAAGCGCAGTGTGGGGGTGCTGAGGCGCCGTTGCCGTCgagtgacctctgacctgcaGGACGCCCGTGCGCTGACTGACAGTTTGCAGGTCAGAGGTCATGAGCTGGAGAGGAAACAGAGGAGgtttgATGCAGAGCTGGCGCAGGCGCTGGGTGAGGCGAGCATTGAGCGTGCTCAGAAGGAGAGGGGGGTGCAGGAGCTCACAGCGGTGCGGGGGGAGCTGTTCAAACTGCAGCGAAGTCTAAAGgagtcTCAGCTGGCAGTGGCTAGGCTGGAGGCGGAGCGGGTGGAGCTCAGTGCCCGTGTGACTGACCTGTCTGGCCCAGCTGCCTTGGCGCCAAGCTCTGCCCCTGTGCTGAGTCAGAGGGTCAGAGAGCTGGAGATCCGCGATGCGGAGCTGAGCCAGGAGATCAGCACACTGACCAACAGCACCCAGCACCAGGAGCAgCTGCGTCTTCGCTgtgagatggagatggagagaatGAAGCAGATCCACCAGAAGGAACTGGAGGACAAGGAAGAGGAGCTGGAGGACGTGCAGAGAGCCTCACAGAGACGgCTGAGGCAGCTGGAGATGCAGCTGGAGCAGGAGTATGAGGAGAAGCAGATGGTCCTGCACGAGAAACACGACCTGGAGGGACTGATCGCCACGCTGTGTGAGCAGATCGGTCATCGTGATTTTGACGTGGAGAAGCGGCTGCGTCGGGACCTGAAGCGCTCCCACGCCCTGCTGGCAGATGCACAGCTTCTGCTGTCCACAGTGGACACGGCCGGACAGCACGCCAGCCGCGAGGAGCTGGAGAAGCTGCACTGCCAGctgGAGGACAGTGAGGCGCAATGTGCTCAGGCTGTCAGTGTGCAGAGTGTCCTGGCACGGGAGCTGGAGAACAcacagctggagctggagcagttgtACAGACACAAGAGCCTGgtggatGAGCAGGTGTTGCAGCTGCAGCATGAGAAGGCCGACCTGCTGAAAAGACTGGAGGAAGACCAGGAGGACCTGAGCGGCCTGATGGAGAAACACAAGGCCCTGATCGCACAGTCCTCCAGTGACATCTCTCAGATCCGGGAGCTGCAAGCGGAGCTGGAAGAGGTGAAGAAGGAGAGGCAGAGTCTGCAGGAGAAGCTTCAGCAGAGTGTGAACCGAGTGCAGTTTCTGCAGGGCAGCATGGTGGAGCGCAGCATTGTGGGCCGGCAGGAGGCCAGAGTCACGGACCTGGAGAACAGACTGGAGTACCAGAGAGGACAGATACACCGGCTGGAGGCCCTGGTTCTACGTCTGCGGGACAGTGTGGTGCGGATGGGCATGGAGCTGGAGGGGGCGGCACAGGCAGAGATGGAACAGCGGGAGAGGGCGCGCTGCCTCCAGCAGAGGCTGAGCGAGATGAGGGTAGAGATAGAGGAGCTGgcacagagagagcaggacagcggCCGCCGCTGCGTGGAGCTGGAGATGCAGGTGGTGGAGCTGACTGCAGTCAGGCAGACATTACAAGCTGATCTGGAGACATCGATCAGGCGCATTGCTGATCTACAGACTGCCCTGGAGGAGGAGTCCAGTGATGAGAGTGATGATGAGAGtGTACAGACAGCAGTGGACTCCTACGGGAGAAAGAGAGATCTtgacagTGCATCCAGCATGGGCTCCCTGGCCAGTGAGGCAGTGGGTGAGGGTATCAGGTCGTGGCTGGGGGTGCCTCGCGGCCGGGGAGGGTCATCCTGGGGGGGCAGCAGCCTGGGGCGCCAGTCTGTTACCGACACCATGAGCAACTACAGTTTCAGGTCTTTGCCCCGGGATGCAGAGGAGGGCCGCCCGGGCTCGTCTCTCAGTGCGCTCAGTGTGCCGCGGCTGGCAGAGAGGGGGCATGAGGGCGAGACCACCGGTGCCTCGGTGCTGCGCAGGAGAGCCACGCCCAGTGAGGGGGGGgacacccccacacccccctcGGACAACCTCCCCCCAAGCCGCCCCAGCATCCTGaagccccccagccccctgctGTCCCGCTCCTCCAGCCTGCGCTCCCTGTCTGAGGGGGGTCCGGGGGGGGGCAGGCTGGCACGCTTCGGCTCCTGCGACTCGCTCTCTTCCCTGTCCTCACCCCCCCCCGGCCACCGCGGCCTCTCTGGCCCCAACCCCCCCATccctgaggaggaggaggcggcagCACCCAGGTCGCCCAGGTTGCCCAGGTCTCCCCAGCCAATGAGACGCAGACTGTTGCTGGGGGCGGGAGAAGGGGAGGAGCTGCCTGAGTTGGGGGCAGAGCCTCTGGTGTTCCGTAACAGGCGTCTTCTCGGTGACCTGCCAGAGAAGGACCCGGGTGAGAAGGGGAGCGAGGAAGACTTCCTCCCCGCGATCCGCCGATCCCAGTCCGTCAGCAGTCTGTCCGGGGTGGGGGAGGCTGGCAGGGGGGGGTCGCGGCGAGCCCTCAGTGTGCATTTCGGGGAGCTGCCCCCCTCTAGGGCCCCAGCCCCCCTCTCAGACTCAGACTCGGAAGAAGGCTGTGCGGTGGGGGGGCGTGTGGGCAAGCGGCTGGAGGCAGAGGGCAGCGAGGGGGACATCAACAGCGTGATGAGGAAGTACCTGCGCAGGGCAGAGCCTGAGATGCATCCCTATGGGCAGTTCTCCAAatctttctatatataa

Function

GO: NA

KEGG:

id description
K10362 MYO18; myosin XVIII

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018560 True 6751 mRNA 0.62 44 14266095 14288995

Neighbor

gene id symbol gene type direction distance location
AMCG00018554 msi1,LOC100704609 coding downstream 42778 14208436 ~ 14223317 (-)
AMCG00018556 NA coding downstream 59972 14205321 ~ 14206123 (-)
AMCG00018557 NA coding downstream 63808 14201096 ~ 14202287 (-)
AMCG00018544 LOC107658624 coding downstream 81804 14182493 ~ 14184291 (-)
AMCG00018543 NA coding downstream 87783 14174101 ~ 14178312 (-)
AMCG00018561 grk3,LOC107689528,LOC107758628 coding upstream 4223 14293218 ~ 14316293 (-)
AMCG00018563 NA coding upstream 32336 14321331 ~ 14328617 (-)
AMCG00018559 NA coding upstream 43797 14332792 ~ 14359292 (-)
AMCG00018562 NA coding upstream 80089 14369084 ~ 14370273 (-)
AMCG00018572 NA coding upstream 121508 14410503 ~ 14417254 (-)
G117122 NA non-coding downstream 32471 14232796 ~ 14233624 (-)
G117066 NA non-coding downstream 165988 14095291 ~ 14100107 (-)
G117015 arpc1b non-coding downstream 299826 13897500 ~ 13966269 (-)
G117012 arpc1a,LOC102781765 non-coding downstream 375992 13887421 ~ 13890103 (-)
G117011 arpc1a,LOC107388895,LOC107674705,LOC107703414 non-coding downstream 378728 13886309 ~ 13887367 (-)
G117221 NA non-coding upstream 23263 14312258 ~ 14399555 (-)
G117223 NA non-coding upstream 33090 14322085 ~ 14408949 (-)
G117227 NA non-coding upstream 68440 14357435 ~ 14402346 (-)
G117234 NA non-coding upstream 77470 14366465 ~ 14367911 (-)
G117245 NA non-coding upstream 128370 14417365 ~ 14459293 (-)
AMCG00018555 LOC107689851 other downstream 2941 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 538225 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1008845 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 1975551 12287568 ~ 12290544 (-)
G116577 NA other downstream 2354759 11911014 ~ 11911336 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 214408 14503403 ~ 14520875 (-)
G117377 NA other upstream 447143 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 1209667 15498662 ~ 15518315 (-)
G117784 NA other upstream 2719903 17008898 ~ 17009301 (-)
G117823 NA other upstream 2937095 17226090 ~ 17256271 (-)

Expression


Co-expression Network