AMCG00018569 (unc119.1,unc119b,LOC107712459,LOC107753165,LOC107550938,LOC107687994)


Basic Information

Item Value
gene id AMCG00018569
gene name unc119.1,unc119b,LOC107712459,LOC107753165,LOC107550938,LOC107687994
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14404406 ~ 14406978 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018569
GTGCCCCGCAGCGGCGACAGTGACGCGGCGTCCCGCAGAGGCGTGCGTGGGTAGCGTGGCCACGCAGCGCGTCACGCCGAATGTGTTGTAGCCATGGAAACTGCCGAGCCCTCCCAGCCAATGGCGAGCGCCTCTCCCCTCGGCGCACCGTGCAGACGCAGGGGCGGCCATCTTGGAcggagcagcagcagccgtAACGTCTGCCTCTGACACAAACatacagagaaaaacacacGGACTTCCTCCGGACAATGAGCGGCTCTAAACCCAGAACTGAGCCACCGCCGACCATGGACCCTGGGCCGGATACGGACACGAGCCAGGCTGCCAGGGACCGCAAGGCAGGCGGCGGGGTCCTAAAGCGCCTCAAGTCTCGGCGGACGCAGCCGGACAGGCGGCCGGTGACGGAGGACGAGTTACGGGCGCTAGGGAGAGAGATCACGCCGGAGGAAGTGCTGGGGCTCCGGGCTGTCACCCGCGatTACCTGTGTAAACCCGAGGATAATATCTACAACATTGACTTCACACGCTTCAAGATCAGAGATCTGGAGACGGGCACCGTGCTGTTTGAGATCGCCAAGCCTCCCACTGCCGACCCTGATGAAgacgacgaggaggaggagagcggagATGCGGACACCAGTACTGGGCGGTTTGTGCGGTACCAGTTCACCCCAGCCTTCCTGCGGCTCCGAACTGTGGGCGCTACGGTGGAGTTCACAGTTGGCGATCGGCCTGTGTCCAGCTTCAGGATGATCGAGAGGCACTACTTCCGGGAGCGTCTTCTCAAGAgctttgactttgactttggCTTCTGCATCCCCAACAGCAGGAACAGCTGCGAGCACATCTATGAGTTCCCCCCATTGCCCGAGGACCTCATGAGCTGCAGTGCAGAGCTGTGCTCCTGGGGGGGCTTTGAGAGGAGGCATATCTTCTCAATCTCTGAGCGGAGTTATAGGGTGCACATCCAGCCCAGTCAGGCCCGGCCCAGTGTCACCGCAATGCTGAGGGTGGGGGCATCATTCCCTCCTATTTAA

Function

symbol description
unc119.1 Predicted to enable lipid binding activity. Involved in cilium assembly. Acts upstream of or within Kupffer's vesicle development and nervous system development. Predicted to be located in cell projection. Predicted to be active in cilium. Is expressed in several structures, including mesoderm; nervous system; neural plate; pronephric duct; and spinal cord neural tube. Orthologous to human UNC119B (unc-119 lipid binding chaperone B).
unc119b Predicted to enable lipid binding activity. Acts upstream of or within Kupffer's vesicle development and visual perception. Predicted to be active in intercellular bridge and microtubule cytoskeleton. Is expressed in several structures, including adaxial cell; nervous system; pronephros; solid lens vesicle; and spinal cord neural tube. Human ortholog(s) of this gene implicated in immunodeficiency 13. Orthologous to human UNC119 (unc-119 lipid binding chaperone).

NR:

description
PREDICTED: protein unc-119 homolog B-like

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0070121 Kupffer's vesicle development biological_process
GO:0060271 cilium assembly biological_process
GO:0007399 nervous system development biological_process
GO:0005929 cilium cellular_component
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018569 True 1040 mRNA 0.61 5 14404406 14406978

Neighbor

gene id symbol gene type direction distance location
AMCG00018570 NA coding upstream 10562 14392309 ~ 14393844 (+)
AMCG00018568 NA coding upstream 15060 14389026 ~ 14389346 (+)
AMCG00018558 NA coding upstream 36445 14361036 ~ 14367961 (+)
AMCG00018550 NA coding upstream 166457 14232722 ~ 14237949 (+)
AMCG00018552 LOC108412053,LOC101077666 coding upstream 172092 14230990 ~ 14232314 (+)
AMCG00018565 sppl3 coding downstream 13297 14420275 ~ 14431626 (+)
AMCG00018566 NA coding downstream 38242 14445220 ~ 14446081 (+)
AMCG00018580 NA coding downstream 69940 14476918 ~ 14478333 (+)
AMCG00018579 NA coding downstream 72102 14479080 ~ 14495801 (+)
AMCG00018578 LOC104951472,LOC102789619,LOC107752382,LOC102207611 coding downstream 91621 14498599 ~ 14504059 (+)
G117131 NA non-coding upstream 159088 14244708 ~ 14245318 (+)
G117130 NA non-coding upstream 160203 14242864 ~ 14244203 (+)
G116976 NA non-coding upstream 557314 13846890 ~ 13847092 (+)
G116975 NA non-coding upstream 564435 13839716 ~ 13839971 (+)
G116941 NA non-coding upstream 713039 13666023 ~ 13691367 (+)
G117197 NA non-coding downstream 31014 14437992 ~ 14439091 (+)
G117209 NA non-coding downstream 126985 14533963 ~ 14534200 (+)
G117353 NA non-coding downstream 329118 14736096 ~ 14738327 (+)
G117381 NA non-coding downstream 376528 14783506 ~ 14784333 (+)
G117382 NA non-coding downstream 379047 14786025 ~ 14786487 (+)
AMCG00018564 mlec,LOC106579938 other upstream 4867 14330841 ~ 14399539 (+)
G117178 NA other upstream 56665 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 161689 14239242 ~ 14242717 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other upstream 213329 14189003 ~ 14191077 (+)
AMCG00018538 LOC103397138,LOC107554284,LOC100698873 other upstream 258411 14141377 ~ 14145995 (+)
AMCG00018567 NA other downstream 1980 14408958 ~ 14412279 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other downstream 367137 14774115 ~ 14777110 (+)
G117383 NA other downstream 379645 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 547586 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2661234 17068212 ~ 17069670 (+)

Expression


Co-expression Network