AMCG00018570


Basic Information

Item Value
gene id AMCG00018570
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14392309 ~ 14393844 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018570
ATGAAGAAGCTCCTTGGGCAGCAGGTGGGACACAGGGACCTGGAGGACATCCTAAGGGACATTGACCTGAATGGGGACGGACACGTGGACTTTgaagCTGATGAGGACCGGCCGACTGACAGCCCCGTTGCCATGGAGACCCCGGATCTGTCCCGGCTCCCAGAACTGTGTGGCCCCCCGGTGGCCCCGTCCGGAACTGCAGTTGCATTACTTTCGTAG

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018570 True 219 mRNA 0.61 2 14392309 14393844

Neighbor

gene id symbol gene type direction distance location
AMCG00018568 NA coding upstream 2963 14389026 ~ 14389346 (+)
AMCG00018558 NA coding upstream 24348 14361036 ~ 14367961 (+)
AMCG00018550 NA coding upstream 154360 14232722 ~ 14237949 (+)
AMCG00018552 LOC108412053,LOC101077666 coding upstream 159995 14230990 ~ 14232314 (+)
AMCG00018549 NA coding upstream 191965 14192138 ~ 14200344 (+)
AMCG00018569 unc119.1,unc119b,LOC107712459,LOC107753165,LOC107550938,LOC107687994 coding downstream 10562 14404406 ~ 14406978 (+)
AMCG00018565 sppl3 coding downstream 26431 14420275 ~ 14431626 (+)
AMCG00018566 NA coding downstream 51376 14445220 ~ 14446081 (+)
AMCG00018580 NA coding downstream 83074 14476918 ~ 14478333 (+)
AMCG00018579 NA coding downstream 85236 14479080 ~ 14495801 (+)
G117131 NA non-coding upstream 146991 14244708 ~ 14245318 (+)
G117130 NA non-coding upstream 148106 14242864 ~ 14244203 (+)
G116976 NA non-coding upstream 545217 13846890 ~ 13847092 (+)
G116975 NA non-coding upstream 552338 13839716 ~ 13839971 (+)
G116941 NA non-coding upstream 700942 13666023 ~ 13691367 (+)
G117197 NA non-coding downstream 44148 14437992 ~ 14439091 (+)
G117209 NA non-coding downstream 140119 14533963 ~ 14534200 (+)
G117353 NA non-coding downstream 342252 14736096 ~ 14738327 (+)
G117381 NA non-coding downstream 389662 14783506 ~ 14784333 (+)
G117382 NA non-coding downstream 392181 14786025 ~ 14786487 (+)
G117178 NA other upstream 44568 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 149592 14239242 ~ 14242717 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other upstream 201232 14189003 ~ 14191077 (+)
AMCG00018538 LOC103397138,LOC107554284,LOC100698873 other upstream 246314 14141377 ~ 14145995 (+)
G117033 NA other upstream 343156 14046259 ~ 14049153 (+)
AMCG00018567 NA other downstream 15114 14408958 ~ 14412279 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other downstream 380271 14774115 ~ 14777110 (+)
G117383 NA other downstream 392779 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 560720 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2674368 17068212 ~ 17069670 (+)

Expression


Co-expression Network