AMCG00018574


Basic Information

Item Value
gene id AMCG00018574
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14438004 ~ 14443900 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018574
CCTAAGCCCCGCCCCGCTGGTGACGTCGCTGGCGGACGCTGGTTACCATGGCGCGGCCCTCGCTGTGAGACGCACTGGACCCGGCGGACGAGACAGCGGCTGCGCCCGAGGCTCCGGACCAGCGACCGGCCTGCCCGACCCGACCCGACCCGTCCTCAGCTCCAGTGACTGGACAGCACCAATGGACAACGGGACACTGTACCTGTCCGCCCCGGTCAGCCGTGACCGGGTCATCAGCAGATTCCCCCAGtGCTACACCCCGGAGGCCTGTGTGCAGCTGAAGGAGCAGTGGAACACCCAGGTGAGGAGTGCCTGCCAGGACCGAGGAGCCAGAGGCCTGGGcTGGGACACAGCAGGTCAGGAGAAGTTCAAGTGCATTGCCTCAGCTTACTACAGAGGAGCTCAGGTCATCATCACAGTGTTTGATCTGGCCGACATCAAGACCCTGGAGCACACACGgaaTGGACAGAGCAGCGACAGAGCAACCCCAGGACAGGGGGCTGGACAGGCCGGGCTGCTGttagagagggagggggggatttGGAAAGGTAGGGAGAGATAGTAAGGGGGTATGGAGGGAAAGAGAAACTAGGAGAGGGAGAGTGATTGAGAGAAAGGGGCTGGGAAGAGTGACGAGCACCCTGACCCTCTGagcagaggggagagagacCCCTGCTGGCCACACAGTGATAGTGCACTGAAACCATTTAGTTTTTTGAGCACtcctctctctcaaattcaaactcatagctttattggcatgacggGAGTGAtccagtgttgccaaagcatttaagCAACATAGATGTTATATattcatacaatacaatattaataacagacAACATCCCCGTCcctcctgctctccctcctTGTGATTAAACACTAACAGTGGAGTTGCTGTGGTGTGTCGACACACTGCCCCTCAGCAGGACCACACGTATGGACTGGTTTATACTACATTGACTGGACTACACTGGCTTATACTACACTGGACTGGGCTGCAGCCTGAGCTCAGGACCAGTCATGATCACTGTCTTCGAGGTATTTGCCGATGCATTGGAAACTGGAGCTGGCTCCACAGAGACAACAACACCGCTACCACTGGCACAACACTGGCCATGCAATGGAGGGGGCACTAACACAGCAACAGTTCTGTGTCGCGCAGGGCTTCACTTAGATGCTCTGTGGATAACTGACTGTCTGTTGTGGGGTGgaggtgtattttattatgggtcaatttgtattaaatatgattattattattattactattgtagttttttctgttgctgttttctGGGTTAAAATAtcaatgtttgttattttttcatcctgtttatttttaacaactaAGTGGTTCTTtgatggaaacattttaatcagataaagtccagtacagcagcgtccccagccctggccctggagagagacagtacAGTAACAGCACCCTGTAATGCTTTAATACTGCCAGACATGCTTTTTTGTTACACTGACACCGAGCCTTAACCAtgcaaacagataaataaacgAACAGGACTTCTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018574 True 1548 mRNA 0.52 6 14438004 14443900

Neighbor

gene id symbol gene type direction distance location
AMCG00018573 acads coding downstream 224 14433946 ~ 14437780 (-)
AMCG00018572 NA coding downstream 20750 14410503 ~ 14417254 (-)
AMCG00018562 NA coding downstream 67731 14369084 ~ 14370273 (-)
AMCG00018559 NA coding downstream 78712 14332792 ~ 14359292 (-)
AMCG00018563 NA coding downstream 109387 14321331 ~ 14328617 (-)
AMCG00018571 gnaz,LOC107555529,LOC107686467,LOC107744122 coding upstream 7035 14450935 ~ 14460678 (-)
AMCG00018584 NA coding upstream 86102 14530002 ~ 14539282 (-)
AMCG00018587 drg1 coding upstream 147373 14591273 ~ 14596238 (-)
AMCG00018592 NA coding upstream 203192 14647092 ~ 14648105 (-)
AMCG00018591 NA coding upstream 204243 14648143 ~ 14702246 (-)
G117223 NA non-coding downstream 29055 14322085 ~ 14408949 (-)
G117227 NA non-coding downstream 35658 14357435 ~ 14402346 (-)
G117221 NA non-coding downstream 38449 14312258 ~ 14399555 (-)
G117234 NA non-coding downstream 70093 14366465 ~ 14367911 (-)
G117122 NA non-coding downstream 204380 14232796 ~ 14233624 (-)
G117253 NA non-coding upstream 33090 14476990 ~ 14477219 (-)
G117254 NA non-coding upstream 34195 14478095 ~ 14478937 (-)
G117293 NA non-coding upstream 134336 14578236 ~ 14588050 (-)
G117319 NA non-coding upstream 191504 14635404 ~ 14636339 (-)
G117338 NA non-coding upstream 259740 14703640 ~ 14704458 (-)
AMCG00018555 LOC107689851 other downstream 174850 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 710134 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1180754 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 2147460 12287568 ~ 12290544 (-)
G116577 NA other downstream 2526668 11911014 ~ 11911336 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 59503 14503403 ~ 14520875 (-)
G117377 NA other upstream 292238 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 1054762 15498662 ~ 15518315 (-)
G117784 NA other upstream 2564998 17008898 ~ 17009301 (-)
G117823 NA other upstream 2782190 17226090 ~ 17256271 (-)

Expression


Co-expression Network