AMCG00018582 (pisd,LOC107663775)


Basic Information

Item Value
gene id AMCG00018582
gene name pisd,LOC107663775
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14552094 ~ 14554070 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018582
ATGGCAGACTGCAGCTGTGCACTCAAACCCCTGGCCAAGGTGGGCTGGAGGCCGACCAGTAGGTCCATCCCGACCCGGCTACTGTCCCGGGCGTGGGGGCGGCTGAACCAGGTGGAGCTGCCCACCTGGCTGCGCAAGCCCGTGTACAGCCTGTACATCTGGACCTTCGGGGTGAACATGCGTGAGGCGGCGGTGGAGGACCTGCAGCACTACCGCAACCTCAGCGAGTTCTTCCGCCGCAAGCTCAAACCCCAGACCCGGCCGGTCTGCGACTCACACTGCGtggtgagggagaggaggagggagagatgggaggaggaggaggaggaggggaagaggaAAGAGCAGAGTAGGGCAGGGGGACTGCGTCACTGA

Function

symbol description
pisd Predicted to enable phosphatidylserine decarboxylase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of mitochondrial inner membrane. Predicted to be active in mitochondrion. Orthologous to human PISD (phosphatidylserine decarboxylase).

NR:

description
PREDICTED: phosphatidylserine decarboxylase proenzyme, mitochondrial-like isoform X8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018582 True 375 mRNA 0.65 3 14552094 14554070

Neighbor

gene id symbol gene type direction distance location
AMCG00018583 NA coding upstream 4614 14542330 ~ 14547480 (+)
AMCG00018575 NA coding upstream 22657 14519852 ~ 14529437 (+)
AMCG00018576 slc5a1,LOC107713298,LOC106563210,LOC105913283,LOC105014972 coding upstream 33075 14511238 ~ 14519019 (+)
AMCG00018578 LOC104951472,LOC102789619,LOC107752382,LOC102207611 coding upstream 48035 14498599 ~ 14504059 (+)
AMCG00018579 NA coding upstream 56293 14479080 ~ 14495801 (+)
AMCG00018581 NA coding downstream 19 14554089 ~ 14557800 (+)
AMCG00018577 NA coding downstream 20190 14574260 ~ 14588028 (+)
AMCG00018585 NA coding downstream 45192 14599262 ~ 14614445 (+)
AMCG00018586 LOC107677981,LOC107567443 coding downstream 75992 14630062 ~ 14646832 (+)
AMCG00018588 bicdl1 coding downstream 153501 14707571 ~ 14731664 (+)
G117209 NA non-coding upstream 17894 14533963 ~ 14534200 (+)
G117197 NA non-coding upstream 113003 14437992 ~ 14439091 (+)
G117131 NA non-coding upstream 306776 14244708 ~ 14245318 (+)
G117130 NA non-coding upstream 307891 14242864 ~ 14244203 (+)
G116976 NA non-coding upstream 705002 13846890 ~ 13847092 (+)
G117353 NA non-coding downstream 182026 14736096 ~ 14738327 (+)
G117381 NA non-coding downstream 229436 14783506 ~ 14784333 (+)
G117382 NA non-coding downstream 231955 14786025 ~ 14786487 (+)
G117387 NA non-coding downstream 238726 14792796 ~ 14793804 (+)
G117388 NA non-coding downstream 239815 14793885 ~ 14794239 (+)
AMCG00018567 NA other upstream 139815 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 152555 14330841 ~ 14399539 (+)
G117178 NA other upstream 204353 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 309377 14239242 ~ 14242717 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other upstream 361017 14189003 ~ 14191077 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other downstream 220045 14774115 ~ 14777110 (+)
G117383 NA other downstream 232553 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 400494 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2514142 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3427070 17981140 ~ 17983017 (+)

Expression


Co-expression Network