AMCG00018584


Basic Information

Item Value
gene id AMCG00018584
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14530002 ~ 14539282 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018584
ctctctctctctctctctctgcaccgTGACGGGACTGTACCTCCACTCTGTAAGGACTTGCCGAGGGTAAAGGGAAGAAGAGACGCAATACAGAGACACACGCTGCAAACTGCGCAGAGACACCGCATACTGCGCACAGAGACACTACAAACTCCGCATACGAAGATACAGAAAGTGCGCCCGCAGAGACCCGGACGGCGAAACAGGCAAACTGCGCACACGACCAGCGCCGCACAGGGAGACGCTCTCAGCAGCGGGAGATGAATTCGGCGCTCTCACTTCTGATCCTCTGCGCATGTGCCTGTCCCTCATGGGgtAAGAAGGTCCGGTGGTGCTGTGTGTCTGAGCGTGAGCAGAGGAAATGCGCAGAGCTGAGCCGCACCCTGGCTGCCACGCTGCGCCCCCAGGACCTCGCTGCCTTCGCTCGCCTCTCCTGCATCCGAGCACCAAGCACTGTCGACTGCATCTCCAAGATACGGGCAAACCGTGCAGATGTCGTGACGCTGGATGCGGGCGAGGTTTACACCGCCACCAAGCAGTTTGGTCTCACTGTGGTCGCCAAGGAGATCTACAAGGACGGAGGCTGTGTGCTGGCCGTGGCAGTGGTCAGAAATGCCAGCCTGGACGTGCGGTCACTGCAGGGCAGCCGCAGCTGTCACCCTGGGGTGCGTTGGACGGCTGGCTGGAGCCTCCCTCTGGGCTTCCTGCTGTCCAGGAACTACCTGCCCTGGGCCGAGGACCAGCCACTGACCcaggCGGTGGCCTCCTTCTTTAGTGCCAGCTGCATCCCGGGTGCGAGTGGCCTGGCGCCCAGTCTGTGCTCACTGTGCCAGGGTAAGAAGTCTTATATCCGCTCCCGCAACGCCTACTGCGAGACCTCGGACAGCGAGCCCTTCTACAACACACAGGGCGCACTCAGAGGAGGCAGGTCTGTGGCTGCTGTGTGCCGACGGTTCTGTCGCCCCCCTGAGAGAGTTCCGACGTTGTCACCTGGGTCGTGGGCCGGGGGGGGGCGTGGTGACCCGGAACAACTTCCGAAAAGTGGCCCGAAAGTTCCTCACTGTCGCCCAGgcAGCTCTCTGGAGGACAGTGTAGTGCGTTGGTGCTGTATTAGTGCTGCAGAGCAGATGAAGTGTGAGCACTGGGCTCTGAACATAAAGTCTGACCCGCTGGTCTGCGTCCGTGCCACCTCTATGAGCCACTGCATACAGATGATCAAGGCAAGACACtgcccacacatacacacacactatactgcacactAGCACCATCTGTCTCCACAGAGGGACGAGGTGGACGCAGCCTCCTTGGACGCTACACACGTGTACATCGCCAGTCGCTGTGGCCTGGCGCCTGTGGCTGCCGAGTACTATGCGTACAGTGAGCTTTTCTGGAAGGGCTGTCTGCCTGGTGCGCGGGGCAGCCTGTGCAAGGTATGTGTCGGGGGGGAGGAGGAGCCAGGCGTCAAACCCGCCAATCAGAGGTGTGTGGATAACCATAATGAGCGTTACTACGGAAACATGGGCGCTCTGAGGCAAGCAATCTGTGTAATCTGCCATCTGGGTGCCGTGCCCCCCAGTGTGGTGATGACCCGGCCTGTGCTCACTGCCCGCGTCTACGACTTCCTTATGAAATCTCAGGAGACGCTGGCCGCGCAGGAATCCGGGTTCCGTCTATTTGAGTCGGCGCAGTACAGCGAGAGTGACCTGCTGTTCAGCGACCGCGCCCGCTGCTTGGTTCACGCCAGCCACCGCACCCCACATTGA

Function

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0006826 iron ion transport biological_process
GO:0005576 extracellular region cellular_component
GO:0008199 ferric iron binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018584 True 1766 mRNA 0.61 12 14530002 14539282

Neighbor

gene id symbol gene type direction distance location
AMCG00018571 gnaz,LOC107555529,LOC107686467,LOC107744122 coding downstream 69324 14450935 ~ 14460678 (-)
AMCG00018574 NA coding downstream 86102 14438004 ~ 14443900 (-)
AMCG00018573 acads coding downstream 92222 14433946 ~ 14437780 (-)
AMCG00018572 NA coding downstream 112748 14410503 ~ 14417254 (-)
AMCG00018562 NA coding downstream 159729 14369084 ~ 14370273 (-)
AMCG00018587 drg1 coding upstream 51991 14591273 ~ 14596238 (-)
AMCG00018592 NA coding upstream 107810 14647092 ~ 14648105 (-)
AMCG00018591 NA coding upstream 108861 14648143 ~ 14702246 (-)
AMCG00018589 rab35,LOC103397428 coding upstream 199112 14738394 ~ 14749164 (-)
AMCG00018590 gcn1,LOC107699625,LOC107553027,LOC104958133,LOC107698162,LOC104964287 coding upstream 210997 14750279 ~ 14770330 (-)
G117254 NA non-coding downstream 51065 14478095 ~ 14478937 (-)
G117253 NA non-coding downstream 52783 14476990 ~ 14477219 (-)
G117245 NA non-coding downstream 70709 14417365 ~ 14459293 (-)
G117223 NA non-coding downstream 121053 14322085 ~ 14408949 (-)
G117227 NA non-coding downstream 127656 14357435 ~ 14402346 (-)
G117293 NA non-coding upstream 38954 14578236 ~ 14588050 (-)
G117319 NA non-coding upstream 96122 14635404 ~ 14636339 (-)
G117338 NA non-coding upstream 164358 14703640 ~ 14704458 (-)
G117432 NA non-coding upstream 241005 14780287 ~ 14784313 (-)
G117438 NA non-coding upstream 294574 14833856 ~ 14835725 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 9127 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 266848 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 802132 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1272752 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 2239458 12287568 ~ 12290544 (-)
G117377 NA other upstream 196856 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 959380 15498662 ~ 15518315 (-)
G117784 NA other upstream 2469616 17008898 ~ 17009301 (-)
G117823 NA other upstream 2686808 17226090 ~ 17256271 (-)
G117899 NA other upstream 3064074 17603356 ~ 17603848 (-)

Expression


Co-expression Network