AMCG00018587 (drg1)


Basic Information

Item Value
gene id AMCG00018587
gene name drg1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14591273 ~ 14596238 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018587
GAACGCGTCACTGGGCCGGAGAAAACGGTGTGGCGAAAACGTGAGCGACCGCGTTAGTCTTCGATTTACTGGAGCAATTCCccccaaataaatataaatatccgACAACTGGAGAATAACTGACCCATAATACCGTGAAACGACGGCCACTGTACCGCCACGATGAGTTTGCTTGCAAAAATAGCCGAAATCGAGTCCGAGATGGCTCGGACCCAGAAGAACAAGGCGACGGCACATCACTTGGGTCTGCTGAAGGCTCGTCTGGCCAAACTGCGCCGGGAGCTCATCACACCCAAGGGTGGCAGCGGAGGGGGCCCGGGAGAAGgGTTTGATGTGGCGAAGACGGGTGATGCACGTATCGGTTTCGTGGGGTTCCCCTCCGTGGGCAAGTCCACGCTGCTCAGTAACCTGGCGGGCGTGTACTCTGAGGTGGCCGCCTACGAGTTCACCACCCTCACCACCGTGCCTGGGGTCATCCGCTACAAGGGTGCCAAGATACAGCTGCTGGACTTGCCAGGAATCATTGAGGGAGCCAAAGATGGCAAGGGTAGAGGCCGGCAGGTCATCGCAGTGGCTCGAACCTGCAACCTGATCCTGATTGTGCTGGACGTGCTGAAACCACTGGGACACAAGAAGCTGATTGAGCACGAGCTGGAGGGCTTCGGCATCCGGCTCAACAAGCAGCCGCCCAACATTGGCTTCAAGAAGAAGGACAAGGGTGGCATCAACCTCACCAACACGCTGGACTCAGAAACAGTGAAGAGCATCCTGGCCGAGTACAAGATCCACAACGCTGACATCACTCTGCGTGGCGATGTCACAGCTGATGACCTCATCGACGTGGTGGAGGGCAACCGGGTGTACATCCCGTGTATCTACGTGCTGAATAAGATCGACCAGATCTCCATCGAGGAGCTGGATATCATCTACAAGGTGCCGCACTGTGTGCCCATCTCCGCCCACCACCGCTGGAACTTCGACGACCTGCTAGAGCGGATCTGGGACTACCTGCAGCTGGTCCGAATctaCACCAAACCCAAGGGCCAGCTGCCGGACTACAGCTCCCCGGTCGTCCTGCCTGATGACCACACCGCTGTGGAGGACTTCTGCCTCAAAATCCACAAAAACCTCATCAAGGAGTTCAAATATGCCCTGGTGTGGGGGTCGTCTGTGAAGCACAACCCCCAGAAGGTGGGGAAGGATCATGTGATGGAGGATGAGGACGTCATTCAGATTGTCAAGAAGTAAACCGAAATTCCCCCGTCCCATTCTCTGTCCCCCACTTGGCTCGCAGGAAGGGGGGTGGAGAGGAAGAGGGTATTTATCACAGAGGACGGCTGGGCTGGTCAGTTGTACCGCTAATAAACcataatgtaaataaaccaTGATGCTCACGGGACAGGGGGAGGGCGGGGGGCGCCACACAGACTGAATTAATGGCGGCAGCTTGAAGACCATCAGACGCGGTCTAATACTCGGATTGTGCCACAGTGACGTCTCTGGATGTGAAAAAATgagtacatattttaaataaaatccaaagtAATTCAAACTGGGGTACGAGTAAAGCGTGTGACACAATCCCAGCCATGCCACCAGTGTGTTGCAGTGAACTTCAGATGGACTCAGGGTGTGACTGGGGCGTGTGACGGCCCGAGGGACCAGTCAATCACAAGACTGATGCCAGGCAGCACGCAGCCCAACCCCTACACCACACTGCTGTtatagtgtgtatataaatactgcCAATTATTCCTGCTTCCCTTACAtatgtgtacattatatatatataaataaaatgcaataaaaaataaaattaccatTCTGAAAATCATTGCATCTAGATCCTTGAGCTGTCTGTATAAGTCTTCATTACTGatgaccaaaataaataaagctccTGTGAGTAAGTGCCCA

Function

symbol description
drg1 Predicted to enable GTP binding activity. Predicted to be involved in cytoplasmic translation. Predicted to be active in cytoplasm. Orthologous to human DRG1 (developmentally regulated GTP binding protein 1).

NR:

description
PREDICTED: developmentally-regulated GTP-binding protein 1

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018587 True 1917 mRNA 0.53 9 14591273 14596238

Neighbor

gene id symbol gene type direction distance location
AMCG00018584 NA coding downstream 51991 14530002 ~ 14539282 (-)
AMCG00018571 gnaz,LOC107555529,LOC107686467,LOC107744122 coding downstream 130595 14450935 ~ 14460678 (-)
AMCG00018574 NA coding downstream 147373 14438004 ~ 14443900 (-)
AMCG00018573 acads coding downstream 153493 14433946 ~ 14437780 (-)
AMCG00018572 NA coding downstream 174019 14410503 ~ 14417254 (-)
AMCG00018592 NA coding upstream 50854 14647092 ~ 14648105 (-)
AMCG00018591 NA coding upstream 51905 14648143 ~ 14702246 (-)
AMCG00018589 rab35,LOC103397428 coding upstream 142156 14738394 ~ 14749164 (-)
AMCG00018590 gcn1,LOC107699625,LOC107553027,LOC104958133,LOC107698162,LOC104964287 coding upstream 154041 14750279 ~ 14770330 (-)
AMCG00018596 rplp0 coding upstream 177736 14773974 ~ 14778855 (-)
G117293 NA non-coding downstream 3223 14578236 ~ 14588050 (-)
G117254 NA non-coding downstream 112336 14478095 ~ 14478937 (-)
G117253 NA non-coding downstream 114054 14476990 ~ 14477219 (-)
G117245 NA non-coding downstream 131980 14417365 ~ 14459293 (-)
G117227 NA non-coding downstream 188927 14357435 ~ 14402346 (-)
G117319 NA non-coding upstream 39166 14635404 ~ 14636339 (-)
G117338 NA non-coding upstream 107402 14703640 ~ 14704458 (-)
G117432 NA non-coding upstream 184049 14780287 ~ 14784313 (-)
G117438 NA non-coding upstream 237618 14833856 ~ 14835725 (-)
G117441 NA non-coding upstream 260182 14856420 ~ 14857595 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 70398 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 328119 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 863403 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1334023 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 2300729 12287568 ~ 12290544 (-)
G117377 NA other upstream 139900 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 902424 15498662 ~ 15518315 (-)
G117784 NA other upstream 2412660 17008898 ~ 17009301 (-)
G117823 NA other upstream 2629852 17226090 ~ 17256271 (-)
G117899 NA other upstream 3007118 17603356 ~ 17603848 (-)

Expression


Co-expression Network