AMCG00018591


Basic Information

Item Value
gene id AMCG00018591
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14648143 ~ 14702246 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018591
ATGTTGCCATGTGGCTCTCTCCTCCCTTCAGACTCGGAGGCAGTGTCGGAGCTGCGGGAGCTGCAGCCGGGACCGCAGGACTTCGAGACGTGTGGCGTGGTGGGCCGAGGGCGGTTCGCTGAGGTGCGGGTGGTGCGCGAGAGAGCCACGGGAGACGTCTATGCCATGAAAGTCATGAGCAAGGACACGCTGCGCGGCCTGGAAAATGTGGCGTTTGTGGAGGAGGAGCGCGCGATCCTGTCCCGGGGGACCAGTGTCTGGGTGCCACAGCTGCAGCACTCCTTCCAGGACAAGGACAGCCTGTACCTGgtgATGGAGTACCTGCCTGGAGGAGACCTGCTGTCCCTGTTGAACAGAGACATAAAACCTGAGAACATCCTGATTGACCGAACCGGTCACCTGAAACTGGCGGACTATGGCTCTGCAGCTAGACTTGGCGCCAGTAGAAAGGTGAACTCCCACCTGCCAGTCGGGACGCCGGACTTCATGGCTCCAGAGGTCCTGGCCGTGCTGGGCGGGGGTGCGGGGGCGGGCTACGGGGTGGAGTGCGACTGGTGGTCCCTGGGCGTCGTGGCCTACGAGATGATCTACGGGAAGTCGCCCTTCGCTGAGGGCACCACAACCAAGACCATCAACAACATCCAGAATTTCCAGCGGTTCCTGAAGTTCCCTGAGCAGCCAAAGGTGAGCAGGGACTTTGTGGACCTGGTGCAGAGTCTGCTGTGTGGCCCACATGAGCGCCTCGGGTATGAGGGTCTGTGCTGCCACCCCTTCTTCTCCTCCGTGGACTGGAACGGGCTCCGCCACTCTCTCCCTCCCTTCGTTCCCACTCTCCAAGCCGAAGATGACACCTCGAATTTTGACGAGCCCGAGAGGAGGACCCCGCCAGCCGGCCCCCAGCGACACGCCAAGCGCCCGGGCTTCCAGGGCTGGGATTTGCCCTTTCTAGGATCAGTAGCTGCAGGGCTCGACTCTCCAGCGAAGACCAACTCCATGGAAAAAAAGCTTCACATTAAAAGTAAAGAATTGCAAGAAACACAAGACAAATGTCACAAGATGGAACAAGACCTCTCCAGATTCCAGCGTAAGATGTCAGACCTGGAGTCGGTGCTGAAGCAGAAGGATGTGGAGCTGCAGGCCTCGGAGACGCAGCGCAGCATCCTGGAGCAGGACCTGGCCACCTACATCACCGAGTGCAGCAGTCTGAAGCGCAGTCTGGAGCAGGCACGCATGGAGGTGTCCCAGGAGGATGACAAggccctgcagctgctgcatGACATCAGGGAGCAGAGCCACAAGCTCCAGGAGATCAAGGAGCAGGAGTACCAGGCACAGCTGGAGGAGATGCGTGTGGCAATCAGGCAGCTGGAGGAGGACCTGGCGGCAGCTCGGCGGCGCAGTGACCTGTACGAGGCCGAGCTGCGCGAGTCCCGCCAGACCAGCGACGAGCTCAAGAGGAAGGCCTCCGAGTACCAGCAGAAAATGCAGAAGGCCAAGGAGCAGGGCAAGGCAGAGGTGGAGGAGCTGCTCTCCAAACTGgaaaagACTAATGCAGAACAGCAACTCAAAATACAGGAGCTGCAGGACAAACTCGCCAAGGCCGTGAAGGCCAGCACAGAGGCCACCGAGCTGCTGCAGAACATCCGTCAGGCGAAGGAGCGGCTGGAGCGCGAGGAGGGCAGGAAGACGCAGGAGAACCAGGTGAAGAGGCTGGAGATGgagctggaggagaacCTGCGGGAGACCCAGTCTACTGCCCAGCGCATGGAGGCTCACCTGGTGCAGAAGGAGCGGCTCTATGAGGACAAGATCAAGGTTCTGGAGGCCCAGATGAAAGCGGACCTGGCGGAAAAGGAATCTCTGGAGTCCAAACGGGCCAAGCACGAGGAGGAAGCCCGTGAGAACTGCAAAGTCATCAGCGAGCAAAAGGCCTCTCTAGAGCAGCGGATAGCGGAGCTCTCAGAGGCCAACAAGCTGGCAGCGAACAGCAGCATCTACACCCAGAGGAACATGCAGCAGAAGTTCTACCTGGAGACTCAGGCCGGGAAGCTGGAGGCCCAGAACGCCAAACTGGAGGAGCACCTGGAGAAGATCAGCCAGCAGGAGCAGAGCAACAAGGGCCGTCTGATGGAAATGGAGACACGCCTGAGAGAGATCGGCCTGGAGCACGAGGAGCAGAAACTGGAGATCAAGCGGCAGGTGACGGAGCTCACACTGTCCCTGCAGGAGCGGGAGTCTCAGATCAGTGGGCTACAGGCTGCACGCTCTGCCCTGGACAGCCAGCTGCAGCAGGCCAAGACAGAGCTGGAGGAGACCACCGCCGAGGCCGAGGAGGAGATCACTGCGCTCAGGGCTCACAGAGACGAGATTCAACGCAAATTTGACGCCCTCAGAGACAGCTGCTCAgtCATCACTGAGCTGGAGGAGCAGCTGACACAACTGAGTCAAGAGAACGCCGAGTTGAACCGGCAGAACTTCTACCTATCCAAGCAGCTGGACGAGGCGACAGACGACAGCGAGGACCGGATGCAGCTTAGCCAGGACGTGGACAGACTGCGCAGGGAGGTGGCTGACAGAGAGATGCACCTCAACAACCAGAAACAAAACATCGAGACCCTGAAGACGACCTGCACGATGCTGGAGGAGCAGGTGCTGGAGCTGGAGACACTGAACGACGAGCTACTGGAGAAGGAGCGGCAGTGGGAGGTGTGGCGCAGCGCGCTGGatgatgagaaggagcaggcgGAGAGGCGGGCACGGGACATGCAGCGTCTGCTGGACAGCGAGAAGCAGAACAGGCTGCGTGCAGACCAGCGCAGTTCCGAGTCCCGCCAGGCAGTGGAGCTGGCAGTGAAGGAGCACAAGGCCGAGATCCTGGTGCTGCAGCAGGCCCTGAAGGAGCAGAAGCTGAAGGCCGAGAGCTTGTCCGACACGCAATCCAAGCTGCAGCAGCAGATGGACATGCAGAAAACACACATCTTCCGTCTGACCCAGGGGCTACAGGACGCACTGGACCAGACCGACCTGCTGAAGACTGAGCGCACTGACCTAGAGTACCAGCTGGAGAACATCCAGGCCGTGTACTCCCATGAGAAGGTGAAGATGGAGGGCACGATCTCCCAGCAGACCAAGCTAATCGATTTCCTCCAGGCCAAGATGGATCAGCCCTCTAAGAAGAAGAAGGGGATTTTCGGGCGTCGGCGGGAAGAGCTGGGGGGCGTGCCCCAAGTGCCCCTCCCCTATAACGACATGAAGGTTGCGCTGGAGAAAGAGCGCATGCGCTGTTCAGAGCTTGAGGAGGCGCTGCAGAAGATGCGCATCGAGCTGCGCTCTCTACGGGACGAGGCCGCCCGCTTCAAGGCCAGCGAGCACCCCGCACCCTCCACCCCAGCCACAGCCCGGCAGCAGATCATCATGTCGGCCATCGTGAAGGCCACCAAGTGTGCCGTGTGCCTGGACGCCGTGCATTTCGGCCGCCAAGCCGCCACCTGCGTGGAATGTCACGCTATGTGCCACCCAAAATGCTCCCCCTGCCTTCCAGCCACCTGTGGGCTGCCGCCCGAGCTGGCGACGCACTTCTCCGAGGCGCTGAGCCGTGACAAGGCAGCCTCCCCCGCCCTGCAGCTCCGAGAGCCAGGGGGACACGTGCGGCTGGAGGGCTGGATGAAGCAGCCCAGGAATGGGAAGCGGGGGCAGCAGGGCTGGGAGAGGAAGTACATTGTGCTCGACGGGACCAAAGTGACGATATACGAGACCGAGCCCAGGGAAGACTCAGTGAAACCCCAGGAGGAGTTTGAGCTGTGCCTGCCCGATGGAGAGGTGACTGTGCACGGGGCAGTGGGCTCTTCTGAACTGGTCAACACCGCTAAGTCAGACATCCCCTATGTGCTGAAGCTGGAGTCCCACCCACACACCACCTGCTGGCCGGGGCAGACGCTGTACTTCATGGCGCCCAGCTTCCCGGACAAGCAGCGCTGGGTGGCTGTGCTGGAGTCTGTGGTGGCCGGGGGCCGCAGTTCGCGCGAGAAAGCAGAGGCAGATGCTAAGCTGCTGGGCAACTCGCTGCTGAAGCTGGAGGGAGACGACCGCCTGGACATCAACTGTACCCTGCCTCTCACTGACCAGATCGTGCTGGTGGGCTCTGAGGAAGGCCTGTACGCCCTGAATGTGATCAAGAACTCTCTGACGCACATCCCAGGGCTGagctctgtgtttcagatcTTCATCCTGAAGGAGCACGACAAGCTGCTGATGATCATGGGTTCAGAGCGTGCCTTGTGTTTGATGGAAATTAAGAAGGTTAAGCAGTCCTTGGCCCAGGCGCACCTGCCCTCACAGCCCGAGGTCTCGCCCTTCATCCTCGAGACTGTCAAGGGCTGCCACCTGTTCGCCGCCGGCAAGATTGAAAATGCCTCGTGTATCTGTGCAGCCATGCccaataaaatcacaatcttGCGCTACAACGACAATCTTAACAAATTCTGCATCAGGAAGGAGATCGAGACCTCGGAGCCCTGCAGCTGTATCCACTTCACTGGCTACAGCATCATCGTCGGCACCAACAAGTTCTACGAGATTGAGATGAAGCAGTACATGCTGGAGGAGTTCCTGGATAAGACTGATGCGTCTCTGGCGTCGGCTGTGTTCGCGGCGGCGTCTCATAGTTTCCCCATCGCCATCAAGCAAGTCAACCTGGCCACACAGAAGGAGGAGTACCTGCTCTGCTTCCACGAGTTCGGCGTGTTTGTGGACGCGTATGGCCGGAGGAGCCGCACTGACGACATCAAGTGGAGCCGCCTGCCTCTGGCCTTTgCCTACCGGGAGCCCTATCTGTTTGTGACCTACTTCAATTCCCTGGAGGTCATAGAGATCCAGAGCCATGCCGGTCTGGGGTCTCCAGCCCACGCTCACCTGGACATCCCCAACCCGCGGTACCTGGGTCCTGCCATCTCCGCCGGCGCAATCTACCTGGCCTCCTCCTACCAGAACAAGCTGAGGGTCATCTGCTGCAAGGGCAACCTGGTCAAGGAGTCCGGGGAGCTGCAGAGGTCCGGCTCCAACCGAAGCCCCAACAAGCGCAGCCCCCCCACCTACAACGAGCACATCTCCAAGCGGCTGGCCTCGGGCCCAGCCCAGACCGAGCTGCTGCACCGCGAGCCCAGCACGCCCCACCGCTACCGCGAGGGACGCACCGAGTTCCGCCGTGACAAGTCACCTGCCCGGCCGCTGGACCGCGAGAAGAGCCCGGGCCGCATGCTGGACAGCCGACGGGAGCGCTCCCCGGGGCGGCTGTTTGAGGAACGGGGGCGACTGCACACGGGATCCGTCCGCACCCCCCTCACCCCTGTCAACAAGATCCTGAGAGAGGACGCACAACACCCCCCACTCCTGCCCCCCAaccccacacgcacacacacacaagcattaaAACAGTGA

Function

GO: NA

KEGG:

id description
K16308 CIT; citron Rho-interacting kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018591 True 5436 mRNA 0.61 44 14648143 14702246

Neighbor

gene id symbol gene type direction distance location
AMCG00018592 NA coding downstream 38 14647092 ~ 14648105 (-)
AMCG00018587 drg1 coding downstream 51905 14591273 ~ 14596238 (-)
AMCG00018584 NA coding downstream 108861 14530002 ~ 14539282 (-)
AMCG00018571 gnaz,LOC107555529,LOC107686467,LOC107744122 coding downstream 187465 14450935 ~ 14460678 (-)
AMCG00018574 NA coding downstream 204243 14438004 ~ 14443900 (-)
AMCG00018589 rab35,LOC103397428 coding upstream 36148 14738394 ~ 14749164 (-)
AMCG00018590 gcn1,LOC107699625,LOC107553027,LOC104958133,LOC107698162,LOC104964287 coding upstream 48033 14750279 ~ 14770330 (-)
AMCG00018596 rplp0 coding upstream 71728 14773974 ~ 14778855 (-)
AMCG00018598 pxn,LOC107748058,LOC107557596,LOC106579946 coding upstream 82134 14784380 ~ 14797365 (-)
AMCG00018594 ctu1 coding upstream 116537 14818783 ~ 14821860 (-)
G117319 NA non-coding downstream 11804 14635404 ~ 14636339 (-)
G117293 NA non-coding downstream 60093 14578236 ~ 14588050 (-)
G117254 NA non-coding downstream 169206 14478095 ~ 14478937 (-)
G117253 NA non-coding downstream 170924 14476990 ~ 14477219 (-)
G117245 NA non-coding downstream 188850 14417365 ~ 14459293 (-)
G117338 NA non-coding upstream 1394 14703640 ~ 14704458 (-)
G117432 NA non-coding upstream 78041 14780287 ~ 14784313 (-)
G117438 NA non-coding upstream 131610 14833856 ~ 14835725 (-)
G117441 NA non-coding upstream 154174 14856420 ~ 14857595 (-)
G117472 NA non-coding upstream 276795 14979041 ~ 14980384 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 127268 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 384989 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 920273 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1390893 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 2357599 12287568 ~ 12290544 (-)
G117377 NA other upstream 33892 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 796416 15498662 ~ 15518315 (-)
G117784 NA other upstream 2306652 17008898 ~ 17009301 (-)
G117823 NA other upstream 2523844 17226090 ~ 17256271 (-)
G117899 NA other upstream 2901110 17603356 ~ 17603848 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030750 cita coding NC_007116.7 CM002889.2 2409554 ~ 2636078 (-)