AMCG00018593


Basic Information

Item Value
gene id AMCG00018593
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14821991 ~ 14824758 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018593
CACGTGTGTAACCAACGAGCTCACAGATCGTATAGATAGTGTCTTTGGGTAAATCACTGCTGGGACGCCGAGCGGCAGGTCACAGGTCTTGCACGGCACACACGCACATTTTCCGAACTGCAATTCCCGGCATGCAATTGACAGACGGGTTCAGCTTCCTATTTGGTCTGTCCCTGAGCTCTTCAGCACTGAGACCCAGACCCAGACACGACTGTTTCCAAGAACTAGGACGTACGTCATGCAGTACATGTGCAGCATAGCAAATTAATAAGATGAGGCTCCCACCTTGGCCGCGAGTGACAAGTGGGGGTATCTCCAGCCTCCACCCTTGCCTGGCCTCACCCCACCGTCTCTGCAGCTCCTCTTCTGTGGCACCGCCCCCCCCGCTGAACTTTGTCCCGGCCAGTGGCCCCCCCGCCTCGGCCGCACTGGAGAGCCTGCAGGCCTTCGTGGGCCAGTCCCGTCAACTCCTGGTCCTCACTGGCGCCGGGCTGTCCACCGAATCAGGGATCCCGGACTACCGCTCAGAGACGGTGGGCCTGTACGCACGCACCGACCGCCGGCCTGTCCAGCACGCCGATTTCCTGCGCAGTCAGGCGGCCCGGCAGCGGTACTGGGCCCGGAACTTCACAGGCTGGCCCCAGTTCTCAGTGCACCGGCCCAATGCGGCCCACCTGGCGCTGAGCAGCTGGGAACGGCAGGGGCGGCTGCACTGGCTGGTGACTCAGAACGTGGACGCGCTGCACTCCCGGGCCGGGCAGCGGAGGCTCACGGAGCTGCACGGCTGCGCACACAGGGTGGTATGTCTGGGCTGCGGACTGCTCTCCCCGCGAGAGGCCCTGCAGACCCGGATGGCGGCGTTGAACCCGGGCTGGGCGGCAGAGGCGGGAGTGGTGGCGCCAGATGGGGACGTGCTCCTGCGGGACGAGGAGGTGCGCAGCTTCTGTGTGCCGGGCTGCGAGGCCTGCGGCGGCATGCTCAAGCCCCACGTAACGTTTTTCGGTGACACCGTGGACCGCAACACTGTGGAGCTGGTCCACCAGAGGCTGGCCGAGTCTGATGCCATCCTGGTGGCTGGGTCCTCGCTGCAGGTGTACTCTGGCTACAGGTTCCTGCTTGCAGCCAGTGAAGCCAAAATCCCCATCGCCATCCTCAACATCGGCCCCACCAGGGCAGACCACCTGGCCGCCGTGAGGGTCAGCGGCCGCTGCGGGGAGGTGCTGCCTACTCTCCTGCCCCTTTGACCCGAGCACAGACACAGCCGCCCACCTGCAATCCCCCTGACAGACAGCAGCGCAGAAAGGACAGACAGTTGCACTTTGGAGAGCAGTTCAGTGACTTTGCCCCATCTCACTGAGTGTCACCCAGGCCCCTCCTATTTGAGACGGTTTTAACACTAATACACTTGTATATTtgcaataaaatagtttttatttttgtaccgAGTGGTGAGCATTTCTCTCTATCGCTTCCTAAACCAGCAGCGTCACATTTTGCAGTGACTTCAC

Function

GO: NA

KEGG:

id description
K11414 SIRT4, SIR2L4; NAD+-dependent protein deacetylase sirtuin 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018593 True 1508 mRNA 0.62 4 14821991 14824758

Neighbor

gene id symbol gene type direction distance location
AMCG00018588 bicdl1 coding upstream 90327 14707571 ~ 14731664 (+)
AMCG00018586 LOC107677981,LOC107567443 coding upstream 175159 14630062 ~ 14646832 (+)
AMCG00018585 NA coding upstream 207546 14599262 ~ 14614445 (+)
AMCG00018577 NA coding upstream 233963 14574260 ~ 14588028 (+)
AMCG00018581 NA coding upstream 264191 14554089 ~ 14557800 (+)
AMCG00018600 NA coding downstream 6742 14831500 ~ 14834064 (+)
AMCG00018608 cldn5,LOC103357131 coding downstream 102404 14927162 ~ 14927524 (+)
AMCG00018603 ufd1l coding downstream 124878 14949636 ~ 14954263 (+)
AMCG00018611 ppil2 coding downstream 605526 15430284 ~ 15468382 (+)
AMCG00018619 NA coding downstream 758835 15583593 ~ 15585087 (+)
G117389 NA non-coding upstream 24841 14796531 ~ 14797150 (+)
G117388 NA non-coding upstream 27752 14793885 ~ 14794239 (+)
G117387 NA non-coding upstream 28187 14792796 ~ 14793804 (+)
G117382 NA non-coding upstream 35504 14786025 ~ 14786487 (+)
G117381 NA non-coding upstream 37658 14783506 ~ 14784333 (+)
G117380 NA non-coding downstream 30321 14855079 ~ 14899918 (+)
G117521 NA non-coding downstream 667488 15492246 ~ 15529341 (+)
G117557 NA non-coding downstream 802581 15627339 ~ 15627719 (+)
G117574 NA non-coding downstream 868455 15693213 ~ 15695253 (+)
G117573 NA non-coding downstream 870668 15695426 ~ 15698865 (+)
G117383 NA other upstream 33858 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 44881 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 409712 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 422452 14330841 ~ 14399539 (+)
G117178 NA other upstream 474250 14345090 ~ 14347741 (+)
AMCG00018602 LOC102789415 other downstream 129806 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2243454 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3156382 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 3894448 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 4002839 18827597 ~ 18840095 (+)

Expression


Co-expression Network