AMCG00018600


Basic Information

Item Value
gene id AMCG00018600
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14831500 ~ 14834064 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018600
ATGGATGCCGGAGTAGGGGGGCGCACGCAGGGCTGTCCTCTGAAGCCTGACCTGACCTCCCGCAGCTCGGACTCCTCCGCCTTCTCCCAGCGGGCCAAACTGGGGGGGCCGGCAAGGGGCAGTGGGGGTGGTGCTGTGGCGTCTGCGGGGGCAGCCTTGGGTTCGAGTGGTGCGTTCCCATGCGAAGACTGTGGGCGGGCATTCCCAGTGCTGGCGCAGCTCCTGGGCCACCAGCAGAGGGCGCACGGCCTGAGCAAGCCCCACCGCTGCTGCACGTGTGGCCGCCGCTTCGCCCTGCTCTCCAGCCTGCAGGTGCACCAGAGGGTCCACTGGGGTGCTCTGGACTGCCAGATCTGCGGGGAGAGCTTCCCCAGCGCCCCCAGCCTGGCCGCCCACCTGCTGCTGCTCCACGCCAACCCCGAGGACCCCCAGAATCTGCCTGCGGAGAGCCGGCGAGCAGGGAGAGCCAGGCTGGCCCAGGGAGTGCGGCCCCGGCTCCAGCCCCCACGGAGGGAGAGGCGCTACAGGCCGGGGGGGGAGCGGCTGTCTGGGCCCCAGTGGCGGCACACGGACGAGGGGCCCTATGCCTGCGCACGCTGTGGCCAGGCTTTCTCAGAgaaggctgtgctgctgtggcACCAGCAGGCCGGGTGCGGAGCAGGGGGGCGGCGGCAGAGGAAGAGGACAGTGAATCCCGAATCGGAGGCGGTGACCGAGACGGTCGCCCCGACAATGTCAACACCGCAGGCCACTCCCTCCCCTATTGCCCTGCCCCCGCCGCCACCCGACTCTTCCCCACTCCACGGCAGTGCCTCGGTGTCTCCTTCCGCTGCTGCTGTCGCATTCCTTCCCCCTCCTCTCACACCcgctccttctctttctcctcctgCAGCTCCCACACCCCACCAAGCCCCAGCCACCGGCTTCCATCAGTGCAGCTGCTGCCCCAAGCAGTTCAAGACCAGCTCTGGCCTGTCTTCCCACCTGCGCCAGTCTCACGCCCCGGTACCCAAGAAGGAAAAGGAGAGGAAGACGTCAGGGTATTGGCTGTTGCAAGAGGTGGGAGAGAGGGGTACTTACCCCTGCCGGTCCTGCCCCCAGGTTTTCTATACCCCCTCCAGCCTCTCACGACACAAGTGCAGGGAGCTGGGCAGTAAGAGGGCTGCTAGCAAGAAGGAGAGGGTGTTGTCCAAAGTGCAGCCACAGAGGGAGGGTCTGTACAGTTGCCAACATTGCCAAGGGGCCTTTGCGTCGTCCCGTGGGCTCAGGGAGCACGTGACACTGAGACATGGCGTGGTccggagtgagggagagggaaagagggaggatGGGAAAGCAAGCAAGACCTGTGCCCAGTGCCCCAAGGGGTTTAGAAACCCCTTAAGCATCTTCCAGCACAGGACGAGGGAGTGCCGGCAACAGTTGGGGCTCTGCAAGGAAGAGGTGTTGGAGACGAAaaaagaggagaaggaggtgcAGGAGCAGAGGACCGCGAAGCCTGAGAGGACCACAAAGACCTGTGCAACAACAAAACGCTTCCCCTGCCGCTCTTGTGACCAGGTGTTCCAGCACGCGTCCGCTCTGTACCAGCACCGTGAGCAGCACCAGCGGAAAAGGGGGAAAAGTGTGTCCAGCAGGGCCGAGAAGAGGGTGAAGGAGGGGAAGaggagaaaggaggaggaggtggaggtggcTGTTGCCAAGAAGAGAAAGTCATTCCCTTGCTTTTACTGCAGCAAGACGTTCCTGCACCCTGCCTCGCGCTACACCCACAGCCGTGTGCATCACCCCCAGCAGCAGGAACGTGCCAAGCAGTGCTGGGAGGCCCGAACCTGCCTGACCTGCAGGACCCCCTTCAGCAACCGCTCCCTGCTGTTGCAGCACTGCACTATAGGAGGTTGCAAACCGAGGGTGCAGCTGCCTGGAGTGGAGGACCAGCTCTTTGCCTGCGACCTCTGTCCCAAGGCCTACCGCCACCTCCCCAACCTGTATATGCACAGGAAGATCCACCTGAACCCACCAAAGAAGAGTGGGATtagaaggggggagggggaagaggTGAAGGGAAAGAAAGGGGAGGAGGAGACCTTGAACGAAGAGAAATGGGGGAGTGAAGAAACCAAggcagaggaggagaaagaggagaaggaggagattCACCTCTTGCTATCGCAGAGGAGCTCAGAACAGTCTCCCGCCCTGGCACAAGAGCCCCACAGGTTAGGGAAGGGCAGTGGGGGCAGGGGAGGGCTGTTGCTATGCAGCGTGTGCTcgctgggggtgggggtctcCCGAGGGATGCCACGGCGACCACGACTGcagcgggaggaggaggaggagaagaaacgGCGAGAGGAGCGGGGTTTTGGGGCAGGCTGTGTGGACAGGAGGCGGCTGTTTCACTGCCTAGTCTGCAGACGCACTTTCTGCATGCTGGGCGTCTTCCTGAAGCACTGTGAGAAGCACCTGAGCCAGCGGAGAGGGCATCAGGTTAACAGCGGCAGTGAGACGGAGAGCTGTGACAGCATGGACGATGTATACAAGGACTTGGATGAGGACATTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018600 True 2565 mRNA 0.63 1 14831500 14834064

Neighbor

gene id symbol gene type direction distance location
AMCG00018593 NA coding upstream 6742 14821991 ~ 14824758 (+)
AMCG00018588 bicdl1 coding upstream 99836 14707571 ~ 14731664 (+)
AMCG00018586 LOC107677981,LOC107567443 coding upstream 184668 14630062 ~ 14646832 (+)
AMCG00018585 NA coding upstream 217055 14599262 ~ 14614445 (+)
AMCG00018577 NA coding upstream 243472 14574260 ~ 14588028 (+)
AMCG00018608 cldn5,LOC103357131 coding downstream 93098 14927162 ~ 14927524 (+)
AMCG00018603 ufd1l coding downstream 115572 14949636 ~ 14954263 (+)
AMCG00018611 ppil2 coding downstream 596220 15430284 ~ 15468382 (+)
AMCG00018619 NA coding downstream 749529 15583593 ~ 15585087 (+)
AMCG00018618 NA coding downstream 803910 15637974 ~ 15648175 (+)
G117389 NA non-coding upstream 34350 14796531 ~ 14797150 (+)
G117388 NA non-coding upstream 37261 14793885 ~ 14794239 (+)
G117387 NA non-coding upstream 37696 14792796 ~ 14793804 (+)
G117382 NA non-coding upstream 45013 14786025 ~ 14786487 (+)
G117381 NA non-coding upstream 47167 14783506 ~ 14784333 (+)
G117380 NA non-coding downstream 21015 14855079 ~ 14899918 (+)
G117521 NA non-coding downstream 658182 15492246 ~ 15529341 (+)
G117557 NA non-coding downstream 793275 15627339 ~ 15627719 (+)
G117574 NA non-coding downstream 859149 15693213 ~ 15695253 (+)
G117573 NA non-coding downstream 861362 15695426 ~ 15698865 (+)
G117383 NA other upstream 43367 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 54390 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 419221 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 431961 14330841 ~ 14399539 (+)
AMCG00018602 LOC102789415 other downstream 120500 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2234148 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3147076 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 3885142 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 3993533 18827597 ~ 18840095 (+)

Expression


Co-expression Network