AMCG00018604


Basic Information

Item Value
gene id AMCG00018604
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14957253 ~ 14957886 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018604
CCGAGACACCTGCTGGTTAACcccatgctgtgtgtgtgcagagccGAGCCCAGGAAAAAGAAGAAGGTTGACCCGAAGAGGGAGCAGGCACTGAGGGATCGCCTGAAGAAGAAGGTGAAAAAGCTGGAGAAGATCCCGCCTGAGTTCATCCCCATAGAAGACTTTGTCACCCCCGTCAAGTTCCTCGATGAAACCAGGGTGCGCACCCCACCGCAGCTGTCCCTGGAAGAGAGCGAGCGCAGAGCCCTGCTGCTGAAGGAGTGGGCTCGGTTCAAGTACACTCAGAACTGCACAGAGATGGCAGCCATCAGTGCTGCCCTGGACGCCCAGAAGGAGGCACTCCAGCAGCTACGGCAGGAGTCTGAGGAGCTGTATCAGGCTGCAGTCAAACGAGATGCAAGACTCTTCCCCTTTAACCACCAGGGGCCCAGCTACAGCCCACCCATAGACAACTACCGCTCCCCTGATGGCAAATACAATGACATCACCAAGGTCTACACACAGTAG

Function

GO: NA

KEGG:

id description
K17421 MRPL40; large subunit ribosomal protein L40

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018604 True 507 mRNA 0.57 2 14957253 14957886

Neighbor

gene id symbol gene type direction distance location
AMCG00018605 cdc45 coding downstream 8986 14939774 ~ 14948267 (-)
AMCG00018606 LOC106580435,LOC105014311,LOC108265487 coding downstream 34246 14899812 ~ 14923007 (-)
AMCG00018607 sept5 coding downstream 71902 14880599 ~ 14885351 (-)
AMCG00018601 NA coding downstream 81849 14874751 ~ 14875404 (-)
AMCG00018597 NA coding downstream 85450 14859757 ~ 14871803 (-)
AMCG00018609 NA coding upstream 214076 15171962 ~ 15177670 (-)
AMCG00018610 NA coding upstream 279274 15237160 ~ 15292085 (-)
AMCG00018613 aacs,LOC107672615,LOC108255473 coding upstream 421857 15379743 ~ 15418462 (-)
AMCG00018612 bri3bp coding upstream 464029 15421915 ~ 15428751 (-)
AMCG00018614 mapk1,LOC107386038,LOC103371039 coding upstream 568404 15526290 ~ 15535846 (-)
G117441 NA non-coding downstream 99658 14856420 ~ 14857595 (-)
G117438 NA non-coding downstream 121528 14833856 ~ 14835725 (-)
G117432 NA non-coding downstream 172940 14780287 ~ 14784313 (-)
G117338 NA non-coding downstream 252795 14703640 ~ 14704458 (-)
G117319 NA non-coding downstream 320914 14635404 ~ 14636339 (-)
G117472 NA non-coding upstream 21155 14979041 ~ 14980384 (-)
G117501 NA non-coding upstream 256282 15214168 ~ 15214431 (-)
G117646 tbx1 non-coding upstream 1064712 16022598 ~ 16025073 (-)
G117710 NA non-coding upstream 1336944 16294830 ~ 16296445 (-)
G117809 NA non-coding upstream 2196116 17154002 ~ 17155261 (-)
G117377 NA other downstream 218941 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 436378 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 694099 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 1229383 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1700003 13253085 ~ 13257250 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 540776 15498662 ~ 15518315 (-)
G117784 NA other upstream 2051012 17008898 ~ 17009301 (-)
G117823 NA other upstream 2268204 17226090 ~ 17256271 (-)
G117899 NA other upstream 2645470 17603356 ~ 17603848 (-)
G118075 NA other upstream 3508482 18466368 ~ 18474245 (-)

Expression


Co-expression Network