AMCG00018610


Basic Information

Item Value
gene id AMCG00018610
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 15237160 ~ 15292085 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018610
ATGGCTGCCGTTGGAACTGCAGAGAGCCGGGGAGCGTCAGATGGCCAACAGAAGTTCTCTTCCCTGCCCACCTTCCTGCCTGTGTCCTACCAGATCCAAAATGCAGAGTCCTCCTTCTTCCTGAAGGAGGCCGGCCAGGAGGTGATGAGGAACACCAGCCTGCAGACTCGGGCCGAGCCTTTCTTTATCCACATGGCGGAAGGGATCCCCACGGTCAACTGCAGCTATGGCAACCTCTCTGCAGAGGCCCCCGTCCCCCTGGAGCTCCTGCAGTCCACACCTCGCATCCTCGCCGGCGCCACCCAGCTCACCTTCAACTGGAAAGTCAGGGCGCACATCGTCAACGACCGGGTACACTTCCAAAAGCCCAGAGTGCAGACTTTGTTCTACCTGACTGGGCGAAGCTGGGAGGAGGCTGCCCTGACTGAAAGGCTGCCCTGCATTAAGGTTTTTGCCTTCCAGGAGACCCAAGAGGTGATGGCAGGCTGCAGGCTGGAGGGGAGCCTGGGGATCTGTTTGGCGGAACTGGAGCTCCTGCCCAGCTGGTTCAGCCTGCCTCCGATGGGCCCGGGACGGAAGAAGCCCGCAGAGCAGTGGGACGGCACCAGTGTGGAGTTGTACTACACCGTGCAGCCGATGGAGGGCGATGGTGACTGCAGCACTGGGGACCCCAGGAAAGGCAATAATGCCATTCGCCCAGGGCAGGACGAGGCCTCGCCCTCCATGCTGCGGATTGGCTCGGTCTACCTCTACCACACCCCAGAGGACGGCCCCCTGGCGCCGGAGCTCAGGCTGGATGATAACCTTGTGATCCACGTGGCGCCCAGTCCTGTGAAGCAGGGTCAGATCATCACGTTTCGGATCTGCATGGAGGCCGTCTCCACAGTGGAGCAGTTCACACTGAGGGCCTTGTTTAAGGAAGGGGTGAACTTTCTCACCATGAAGCCCACTGACCCATTGCTGTGGGAcatcaaacaggaagtggagtCTGGAAGTTCGGCAGTGTTGGCTCTCTGTCAGAGGAGGATTATACCTGCAGGAAACAGCAGCACTGACCTGGAGACGTCTCAGGCCAAACTAGGACACACGGCCAAGCACACAATGCGGCAAACACCAACACAGCAGTTTGCTCTGCAGGACCTTATGCGGAGAGAAGGCCTCGCTAAATACACGCCTGTTTCCGAAAATGTTCCCATCCCCAGCCAAAGGCATCTGAAAGCCGCTAAGGCAAGCTCTGGTGAATGTCAGATTCAGCTGGGCTTCTTTGAGAAGGCTTTTGTCCCCAGTCCAATCTGCAGTTCTCAGACGTGTCCTGGCTCCCTGCTCATCACTGGAACCTCCCAGGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018610 True 1350 mRNA 0.58 7 15237160 15292085

Neighbor

gene id symbol gene type direction distance location
AMCG00018609 NA coding downstream 59490 15171962 ~ 15177670 (-)
AMCG00018604 NA coding downstream 279274 14957253 ~ 14957886 (-)
AMCG00018605 cdc45 coding downstream 288893 14939774 ~ 14948267 (-)
AMCG00018606 LOC106580435,LOC105014311,LOC108265487 coding downstream 314153 14899812 ~ 14923007 (-)
AMCG00018607 sept5 coding downstream 351809 14880599 ~ 14885351 (-)
AMCG00018613 aacs,LOC107672615,LOC108255473 coding upstream 87658 15379743 ~ 15418462 (-)
AMCG00018612 bri3bp coding upstream 129830 15421915 ~ 15428751 (-)
AMCG00018614 mapk1,LOC107386038,LOC103371039 coding upstream 234205 15526290 ~ 15535846 (-)
AMCG00018615 NA coding upstream 260619 15552704 ~ 15569734 (-)
AMCG00018616 top3b coding upstream 278187 15570272 ~ 15586730 (-)
G117501 NA non-coding downstream 22729 15214168 ~ 15214431 (-)
G117472 NA non-coding downstream 256776 14979041 ~ 14980384 (-)
G117441 NA non-coding downstream 379565 14856420 ~ 14857595 (-)
G117438 NA non-coding downstream 401435 14833856 ~ 14835725 (-)
G117432 NA non-coding downstream 452847 14780287 ~ 14784313 (-)
G117646 tbx1 non-coding upstream 730513 16022598 ~ 16025073 (-)
G117710 NA non-coding upstream 1002745 16294830 ~ 16296445 (-)
G117809 NA non-coding upstream 1861917 17154002 ~ 17155261 (-)
G117853 NA non-coding upstream 2174049 17466134 ~ 17466434 (-)
G117856 NA non-coding upstream 2222772 17514857 ~ 17515120 (-)
G117377 NA other downstream 498848 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 716285 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 974006 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 1509290 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1979910 13253085 ~ 13257250 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 206577 15498662 ~ 15518315 (-)
G117784 NA other upstream 1716813 17008898 ~ 17009301 (-)
G117823 NA other upstream 1934005 17226090 ~ 17256271 (-)
G117899 NA other upstream 2311271 17603356 ~ 17603848 (-)
G118075 NA other upstream 3174283 18466368 ~ 18474245 (-)

Expression


Co-expression Network