AMCG00018619


Basic Information

Item Value
gene id AMCG00018619
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 15583593 ~ 15585087 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018619
ATGCTGCATCTCAAGTTTATCCAGGCCTGCTGCCTCACCATGCTGATCCTATGCCCTTGCAGCAGTAGCCCAGTGACGTGTGCAGAAGACGCACTGAAACTCCCAGTGAGCTCCCAGGTCTGCACTGAAAACTTGAAACAATTTGATTACCACATCAATGACATGTATGACCAACTGAACGACAGAAGTGTGGCACCGTGGAATTACACAGAGAAAAAGGATGTGAGTCGAGTACCTCAAGTCATCCATGAGGCCAACTGCCTCACCAGCCACTCCTGCACAGAAGTGACGACCAGCGCTTCCAGCTTTGAGACGATCCCCTTCTCTATCAAAATACCAGTCCTCAGAGTAAACGACAGATGCACCACCTTCTCTCTAGACTTTGAGAGCGTTACGATAGCCTGTCTATGCGCTACTGCTAGGAAGCAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018619 True 432 mRNA 0.49 3 15583593 15585087

Neighbor

gene id symbol gene type direction distance location
AMCG00018611 ppil2 coding upstream 115211 15430284 ~ 15468382 (+)
AMCG00018603 ufd1l coding upstream 629330 14949636 ~ 14954263 (+)
AMCG00018608 cldn5,LOC103357131 coding upstream 656069 14927162 ~ 14927524 (+)
AMCG00018600 NA coding upstream 749529 14831500 ~ 14834064 (+)
AMCG00018593 NA coding upstream 758835 14821991 ~ 14824758 (+)
AMCG00018618 NA coding downstream 52887 15637974 ~ 15648175 (+)
AMCG00018620 NA coding downstream 83728 15668815 ~ 15669669 (+)
AMCG00018624 NA coding downstream 97368 15682455 ~ 15691741 (+)
AMCG00018623 NA coding downstream 187222 15772309 ~ 15777303 (+)
AMCG00018625 NA coding downstream 200806 15785893 ~ 15790897 (+)
G117521 NA non-coding upstream 54252 15492246 ~ 15529341 (+)
G117380 NA non-coding upstream 683675 14855079 ~ 14899918 (+)
G117389 NA non-coding upstream 786443 14796531 ~ 14797150 (+)
G117388 NA non-coding upstream 789354 14793885 ~ 14794239 (+)
G117387 NA non-coding upstream 789789 14792796 ~ 14793804 (+)
G117557 NA non-coding downstream 42252 15627339 ~ 15627719 (+)
G117574 NA non-coding downstream 108126 15693213 ~ 15695253 (+)
G117573 NA non-coding downstream 110339 15695426 ~ 15698865 (+)
G117660 NA non-coding downstream 498266 16083353 ~ 16121445 (+)
G117768 NA non-coding downstream 1163782 16748869 ~ 16749971 (+)
AMCG00018602 LOC102789415 other upstream 601888 14954564 ~ 14981705 (+)
G117383 NA other upstream 795460 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 806483 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 1171314 14408958 ~ 14412279 (+)
G117178 NA other upstream 1235852 14345090 ~ 14347741 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 1483125 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 2396053 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 3134119 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 3242510 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 3309248 18894335 ~ 18908956 (+)

Expression


Co-expression Network