AMCG00018631


Basic Information

Item Value
gene id AMCG00018631
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 16032700 ~ 16050889 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018631
GTCCCGGTCTGGTGCTGTAGTGAAACTGGGAAGTCCGTGCTGCTGAGTAGTTGCCATTTTAGTGCTGGGATTCCCCCTGTTCTTCACTGAGTGTGAAATGATCAACGTGGAGTAACAGCATTTGTGTACAAAGGCCATCCCACTTGCTGCTGACTAGTTCCAGGGCTCTTGAAGAGGAAGTGATGTCACGGCCGCCACCTGTGCCACAGTTTGTCCTGCGGGGGTGTGGAGCCCCCGTCAACACGTTGCATTTCAGCTGCCGAGACCCTGGCCGCCCCCTGCTCTTCTCTGGCTCGGCCAATGGGTGTGTCCAGGTGTGGAGCCTGACGACAAGGCGGGCAGAGAGGGTCATGGAGGGCCACACGGGGGCCTCGGTGCTGTGGCTCCAGACACTGGGCTCACCGCACGTTCTCGTCAGCCAGGGCCGGGACATGCACGTGTGCCTCTGGGACCTGAGTGAGGGGAGGAGCGAAGTGACCGACTCCCTCCTGACGGGCAGCGTGGGCTTCTGCCAGGGCTCTCTGCTGGACTTGCACACTGGCCACTGGCTGCTGGCGCTTCCTGGAGCCGACACGACGGAGGTGAAGGTTATTGATCTACCCTCTAAAGTGCCAGTTTGCACCTTAAAACCAGACACCAAGCTGGGCATGCTGATGTGTGTGAAGCTGTGGCAGCCCGAGTCTGGCTGCAATCCTCAGCTGTTGGCTGGCTTTGAGGATGGCTCGATCGCCCTCTGGGATCTCCTAGAGCGCAGGCTGCTGGGCCGCCTGGCTGCCCACTCTGAGCCAGTCATGTGCCTTGACTTTGACCCCGGGAAGTTAAGAGGCGTCTCAGGCTCTTCGGAGAAGGCCGTCAGCTCCTGGACGCTTGATGGACAACAGAGCCTTCAGCTGCAGGGCTCAGTTGAGCTGGTCAACCCTGGGATTTCGCAGCTCAGTCTCCGGCACGACTGCAAGATCCTGGCGGCAGCTGGGTGGGACCATCGAATCCGGATTTTCGGGTGGAAAAAACTCAGACCCCTTGCCGTTCTCCAGTACCACACTGACAGTGTGCACTGCGTCACGTTCTCGGACCACCGGGACACCTCCAAGGGACTCATGGCGGCCGGATCCAAGGACCAGCGCATTAGCATTTGGTCGTTGTACAATCAGAGCTGTCCATCAGTGTGAGTAATGGATGTTAGCTGAAGAACTTGGTTGCACTGTTTCTAAGTGTGGAGCTCTCTACTGGTTCCACATGGACACTGTTCAGAAGAGCCAAAAGCGTCCAATAATAGCTTCCATTCCCATAAAAGTCCGTATCTCCAAAGCTAAGCAGCGTGACAGAAGGTCAAGGACAGAGTTTGCAGGAACCAAAATGAAATTCTTGCCTCCCAATTCTCAGCCCTGTGGAAGGTATTAAATAACAGCCCGACTACAGTAGGCCACTTGTTCATCAGGGTTGTGAAGACtgcaggttttatttaaatattttccctttATATTTTACTTCCCCTGCTGGGGCTTCTTAAACTTCTGTCCTGACACCAGCTTTGGTTTCAGCGTGTGTTAATGGAATCGCAATCGGTGCTCAACAGGGATATGCGCCAATTAAAACCAACAGAATCTGAACCTTGTATGTGTTCATTTGCATTGAAACTGCAGTTCTGTACTGTGCCTGCCTCCTTTCAAGGTGGGTTTGGTGGCTGAATGCTGTCTTTTAAGCCCAGTGAACAGAGAAATCTGCCAAACCCGCTGTCTGCTTCAGTTTACTTTGGGCCAAGATGGAACACGTTGAGATGCGGTGTCTTTGTGGACTCTCTGCAGTGCGTGTTTTAGGGAGGGAAGAATGAAAGAGCAATCAAAAGAAAAGTTGTAAATAACTTAAGTCTGTGCTTTAGTTCTGGTAGCAATTCACTATGTGGCACACCTGACACACAATTCATGGAATTTTAATCTGTTATTCTGTCAGATAAAAAGGATggattatttattctatttgcTCTTTCTGGTAGGAGATCTGCTTGAGTAGACTTGAATTTGAACTAGGAACTAATCAGCAAACTGATCCATTCTGGGGttgttggttgtttgttttttttttgttttttttcctgcattgaCCTTTTCTCTGACCCAAGCCACATTTGTCAAACAATGCTAATCACAAACCTATAGACAGCAAATAGAAGAGCTTTGCTTGTTTACAAGATCGATTAGAAACTATTAGCTCAGTTTTCATGAATAGAGAGCAGAGGAGAAAAGGAGGTCATGTTCAGCAATTGTCAGTGTCTTGGGGaggaagtaaaaataaatgttattcaaAAAAAGTTTTGTATTCAGCGTCCCCCCCGTAGCAATAAGGATGGATGGTGACagtaaataatgttttcttcttAACAGGTCTTCAGTCTTCCTATTGGCTGTAATGGCACATTATGCATCTGCTGGCATTTAGTGCACTGGCCCTCGGTTTCACTGAGTTTTGtgtctggttttattttattatcttttttttgttctttttaaagctgtgcttgttttgcttgtttttatcaTGCTGCATTTTACTGTCTGCTTAAGAATAAATTGCTGCTTGCTCGTTTGTGAAACTTATTATGCTTTTatgacttttgattttgttgtttgatGTCCTGACCCAGATTGTAAACATAGTAGGCAGTTTTGGGTggaattttttaattttgctgttgATGCTTTGTTTCACGTCCTTCCCCAAAATATTGCATACACAAAGATATGGAAAAAATACACGCAGCGGTTTGATGATGTCATGCACAATGTTATCATTTGGAGTTATCTTGTATTCTTGATGGTCATTTATTCCACAGTACTGTGTATCTCATGGGTAAAAGTGTTATGTATCATTGTGTAGAACACAAAAGCACCAGGTGTCCCTAGTTGTCCATGTAATTGCTGCTTGTAATAGGTgaa

Function

GO: NA

KEGG:

id description
K24732 GNB1L; guanine nucleotide-binding protein subunit beta-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018631 True 2933 mRNA 0.47 8 16032700 16050889

Neighbor

gene id symbol gene type direction distance location
AMCG00018628 cltcl1,LOC106585059 coding downstream 137876 15863081 ~ 15894824 (-)
AMCG00018629 slc25a1b,LOC107665756,LOC107751928,LOC108247150,LOC107704153,LOC107706761 coding downstream 183749 15831182 ~ 15848951 (-)
AMCG00018627 NA coding downstream 207253 15795181 ~ 15825447 (-)
AMCG00018626 pi4ka,LOC108425210,LOC107751806 coding downstream 248154 15752336 ~ 15784546 (-)
AMCG00018622 ube2l3,ube2l3b,ub2l3,LOC106562742,LOC107599129,LOC105014760 coding downstream 375245 15648519 ~ 15657455 (-)
AMCG00018634 NA coding upstream 9817 16060706 ~ 16081326 (-)
AMCG00018633 arvcf coding upstream 39096 16089985 ~ 16096022 (-)
AMCG00018632 arvcf,LOC102781924 coding upstream 65076 16115965 ~ 16143336 (-)
AMCG00018640 trmt2a,LOC107687689,LOC106580466,LOC107672731 coding upstream 238945 16289834 ~ 16293685 (-)
AMCG00018639 zdhhc8,LOC107707819 coding upstream 251025 16301914 ~ 16325216 (-)
G117646 tbx1 non-coding downstream 7627 16022598 ~ 16025073 (-)
G117501 NA non-coding downstream 818269 15214168 ~ 15214431 (-)
G117472 NA non-coding downstream 1052316 14979041 ~ 14980384 (-)
G117441 NA non-coding downstream 1175105 14856420 ~ 14857595 (-)
G117438 NA non-coding downstream 1196975 14833856 ~ 14835725 (-)
G117710 NA non-coding upstream 243941 16294830 ~ 16296445 (-)
G117809 NA non-coding upstream 1103113 17154002 ~ 17155261 (-)
G117853 NA non-coding upstream 1415245 17466134 ~ 17466434 (-)
G117856 NA non-coding upstream 1463968 17514857 ~ 17515120 (-)
G117888 NA non-coding upstream 1533862 17584751 ~ 17585098 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 514385 15498662 ~ 15518315 (-)
G117377 NA other downstream 1294388 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 1511825 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 1769546 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 2304830 13645368 ~ 13727870 (-)
G117784 NA other upstream 958009 17008898 ~ 17009301 (-)
G117823 NA other upstream 1175201 17226090 ~ 17256271 (-)
G117899 NA other upstream 1552467 17603356 ~ 17603848 (-)
G118075 NA other upstream 2415479 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 2487529 18538418 ~ 18547368 (-)

Expression


Co-expression Network