AMCG00018650



Basic Information


Item Value
gene id AMCG00018650
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17068212 ~ 17070690 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00018650
ACAAGATGACGTCAGATGTCATGTGTATTAGTACTGTTTCTGATGATACGGTGGCTGTAGGGCTAGTGGATGGTGTGTGTCCCTGAACTTTTTATGTGATGTTCGAGGTCGCGTATTAAGAAAGGGAAGCCGCCTACTATACTTTTTTTCATTCCCTAGTTCGTGTCGGGCTGAAACTTGAATAATGTATCTTGTGGGCACCATCGCGGCttcattaatttgctttttgatTTTAAAGTGGATGAAGAGGAGAAGGTACTGTATGGACTTGAACAGACTGGACAACAAAACAGTCCTCATTACAGGGGGGAATTCTGGGATTGGGAAAGAGACCGCGATTGCTCTGGCCATGCGAGGGGCTCGGGTGATCATCGCCTGCAGGGACCTCCAGAAAGCTGAGGTGGCTGTGAGGGAAATCAGAAGAAAGAGCCGCAGCATGAATGTGCTTCATATGGAGCTGGACTTGGCCAACCTGCGATCCATCCGCAACTTCTGCAAAACATTTCTTCAGAAAGAGAAGCGGCTggatatattaataaataatgcagGAATGCCAAGTGTCCTTGACTGGACAGACGACGGCTTTAGCATGTGTTTTGGGGTCAACCACCTGGGCCACTTCTTGCTCACGAATCTCCTGCTCGGCCGGTTGAAAGAGTGCTCCCCGAGCCGAGTCATCACCCTGACCTCCACGGCTTACAAGTACCAGAAGCTTGACTTCCAGGACTTGAACTATAACATTGTGCCTTTCTTCTCCTTTTGCCGCAGTAAGCTGGCAAATATCTACTTCACTCACGAATTGTCCAGACTGATGGAGGGGAAAGGAGTGACTGCCTATGCCATACATCCAGGGTATGTTCAAAGCAACTGGACTTGTCACTTCTCTATCCTGTTTCGGATAGTGATGAAGGTGATAATGTACATGTTCTTCGTGCCCTGCAAGGTTGGTGCGCAGACTGTCATCTACTGTGCCGTATCAGATGACGTGCTGCCGTACAGTGGGGGGTTCTTTATTGACTGCCAGCACACAGCCCTGAGGCCCTTTGCAAAGGACGCAGGAGTCGCTAAGAAGTTATGGGAAGCCAGTGAAAGGATGGTGAAACTGGCTTGATGGAAGTTAgaatcccttttttttttatagttgtttgcatttgaaaaagaaaatgttgtgatgcattgtttatgtatgtagATAATTGATTTGCAGCAGATTGACACAAGTCTTTGATCTCTGTCACCTCTCTTGCAGTTTCAAGTCATTGTTGATGCATAATTGCAAAAAAGTGCTAATCAATCACATGGATtccttatacaatgtattgGTATGAATGGTATGATAATGGATGGAATTTATAATGTTGAcagaagtgtttatttattgttttttgagtgtttttatttatatatttattttatcctgtGTCCTTTTGGATGGGGGTTTCACTGGGTGTGGGTGTCTTTTACCACACTTGCTGGTGCactgaaaatattgaataattgtTGAACCCTCTTATACATAAAACAAGATTCCACATAAATAATACAGGGATGCCTTTTTATGCTgataaaaacagtattacacattattcttattttctttttaatttgatgcatttaattaatgtgcTACCATACACGATTGCTGTTTAATCTTAAATCTTGAATACTCCTGCAACTTGGCACACACCACTGAATGATCACTAACTCTtcattacacattaaaacaattctcCTGTTGTTAATGATAATGTGCTGACAAGACTTAAGCAATAGGTGTTGTTGTAAATAAATGGAGCTATTCATTAATCAACAGCAGCTGTCTGGCATATTTGTAATGCATGGAAGCAGT

Function


GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004022 alcohol dehydrogenase (NAD+) activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00018650 True 1849 mRNA 0.42 4 17068212 17070690

Neighbor


gene id symbol gene type direction distance location
AMCG00018649 galnt9,LOC103141400,LOC106920899,LOC106962167 coding downstream 91129 16963043 ~ 16977083 (-)
AMCG00018651 LOC106920899,LOC106940379,LOC107600134 coding downstream 144618 16912767 ~ 16923594 (-)
AMCG00018646 LOC106580457 coding downstream 320251 16747653 ~ 16747961 (-)
AMCG00018645 NA coding downstream 582624 16464741 ~ 16485588 (-)
AMCG00018644 chfr,LOC100195666,LOC106580459,LOC102788874 coding downstream 605849 16438631 ~ 16462363 (-)
AMCG00018652 znrf3 coding upstream 85530 17156220 ~ 17168116 (-)
AMCG00018653 znrf3,LOC106584905 coding upstream 108399 17179089 ~ 17224239 (-)
AMCG00018656 NA coding upstream 196899 17267589 ~ 17290539 (-)
AMCG00018658 NA coding upstream 227574 17298264 ~ 17304621 (-)
AMCG00018657 NA coding upstream 238453 17309143 ~ 17316875 (-)
G117710 NA non-coding downstream 771767 16294830 ~ 16296445 (-)
G117646 tbx1 non-coding downstream 1043139 16022598 ~ 16025073 (-)
G117501 NA non-coding downstream 1853781 15214168 ~ 15214431 (-)
G117472 NA non-coding downstream 2087828 14979041 ~ 14980384 (-)
G117441 NA non-coding downstream 2210617 14856420 ~ 14857595 (-)
G117809 NA non-coding upstream 83312 17154002 ~ 17155261 (-)
G117853 NA non-coding upstream 395444 17466134 ~ 17466434 (-)
G117856 NA non-coding upstream 444167 17514857 ~ 17515120 (-)
G117888 NA non-coding upstream 514061 17584751 ~ 17585098 (-)
G117916 NA non-coding upstream 663986 17734676 ~ 17736324 (-)
G117784 NA other downstream 58911 17008898 ~ 17009301 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 1549897 15498662 ~ 15518315 (-)
G117377 NA other downstream 2329900 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 2547337 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 2805058 14242545 ~ 14263154 (-)
G117823 NA other upstream 155400 17226090 ~ 17256271 (-)
G117899 NA other upstream 532666 17603356 ~ 17603848 (-)
G118075 NA other upstream 1395678 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 1467728 18538418 ~ 18547368 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 1674444 18745134 ~ 18746820 (-)

Expression



Co-expression Network