Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00018655 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 17290702 ~ 17296987 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006950 | response to stress | biological_process |
| id | description |
|---|---|
| K09542 | CRYAB; crystallin, alpha B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00018655 | True | 1194 | mRNA | 0.55 | 6 | 17290702 | 17296987 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018654 | NA | coding | upstream | 33845 | 17253155 ~ 17256857 (+) |
| AMCG00018647 | LOC106592780 | coding | upstream | 141346 | 17141389 ~ 17149356 (+) |
| AMCG00018648 | NA | coding | upstream | 200680 | 17071354 ~ 17090022 (+) |
| AMCG00018641 | NA | coding | upstream | 856399 | 16419039 ~ 16434303 (+) |
| AMCG00018636 | pgam5,LOC107089933 | coding | upstream | 912001 | 16373896 ~ 16378701 (+) |
| AMCG00018659 | taok3 | coding | downstream | 249973 | 17546960 ~ 17574431 (+) |
| AMCG00018662 | NA | coding | downstream | 280948 | 17577935 ~ 17584564 (+) |
| AMCG00018663 | NA | coding | downstream | 288533 | 17585520 ~ 17593696 (+) |
| AMCG00018669 | ksr2 | coding | downstream | 341280 | 17638267 ~ 17677169 (+) |
| AMCG00018670 | nos1,LOC102776628 | coding | downstream | 407507 | 17704494 ~ 17728160 (+) |
| G117813 | NA | non-coding | upstream | 37679 | 17250869 ~ 17253023 (+) |
| G117808 | znrf3,LOC106584905 | non-coding | upstream | 66093 | 17224012 ~ 17224609 (+) |
| G117805 | NA | non-coding | upstream | 128979 | 17161514 ~ 17161723 (+) |
| G117804 | NA | non-coding | upstream | 129662 | 17160762 ~ 17161040 (+) |
| G117801 | NA | non-coding | upstream | 134878 | 17153782 ~ 17155824 (+) |
| G117887 | NA | non-coding | downstream | 287764 | 17584751 ~ 17585112 (+) |
| G117959 | NA | non-coding | downstream | 682024 | 17979011 ~ 17980939 (+) |
| G118005 | LOC101154678 | non-coding | downstream | 920816 | 18217803 ~ 18218099 (+) |
| G118013 | NA | non-coding | downstream | 1169381 | 18466368 ~ 18730812 (+) |
| G118043 | LOC104945943 | non-coding | downstream | 1377287 | 18674274 ~ 18676226 (+) |
| G117786 | LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 | other | upstream | 221032 | 17068212 ~ 17069670 (+) |
| AMCG00018602 | LOC102789415 | other | upstream | 2308997 | 14954564 ~ 14981705 (+) |
| G117383 | NA | other | upstream | 2502569 | 14786623 ~ 14788133 (+) |
| G117379 | rplp0,LOC107701857,LOC107654305,LOC107591459 | other | upstream | 2513592 | 14774115 ~ 14777110 (+) |
| AMCG00018567 | NA | other | upstream | 2878423 | 14408958 ~ 14412279 (+) |
| AMCG00018681 | NA | other | downstream | 684153 | 17981140 ~ 17983017 (+) |
| AMCG00018702 | NA | other | downstream | 1422219 | 18719206 ~ 18721343 (+) |
| AMCG00018712 | NA | other | downstream | 1530610 | 18827597 ~ 18840095 (+) |
| AMCG00018717 | trpv4,LOC106585668 | other | downstream | 1597348 | 18894335 ~ 18908956 (+) |
| AMCG00018732 | NA | other | downstream | 1926181 | 19223168 ~ 19234351 (+) |
