AMCG00018677


Basic Information

Item Value
gene id AMCG00018677
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17805656 ~ 17805925 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018677
ATGTGTCTCCCAGCGGATGCGGCTGCGCCCGCGGCGTGCGCCTCCACCGCCGCCCCGGGAAGCGAGCCCTGCTCCGGCGCGCAGCTGCTGGCCGCCCGGCTCAGGTGGATCGGGGACCAGCTGGAGAAAAGACACAGAACTAAAGAAAGCGGCTCCGGCAAGGACGCGCCGGGCAGCAGGAAGGCGCTCCTCCGCGGCTTGTGCGCCGTGTGCGCCGCGGTGCACCTCGCCGCCGCCGCCGCGCTGCTGCTCGGACGGCGACACCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018677 True 270 mRNA 0.73 1 17805656 17805925

Neighbor

gene id symbol gene type direction distance location
AMCG00018675 c21h12orf49,clg12h12orf49,LOC104923683,LOC104949818,LOC103134957,LOC107087327 coding downstream 8084 17793565 ~ 17797572 (-)
AMCG00018664 rfc5,LOC107668751,LOC107716544 coding downstream 204716 17594187 ~ 17600940 (-)
AMCG00018660 pebp1 coding downstream 228721 17574837 ~ 17576935 (-)
AMCG00018661 suds3,LOC102779790 coding downstream 276402 17516479 ~ 17529254 (-)
AMCG00018657 NA coding downstream 488781 17309143 ~ 17316875 (-)
AMCG00018674 NA coding upstream 17744 17823669 ~ 17832605 (-)
AMCG00018676 fbxo21 coding upstream 28470 17834395 ~ 17840136 (-)
AMCG00018680 NA coding upstream 167510 17973435 ~ 17978220 (-)
AMCG00018684 NA coding upstream 176704 17982629 ~ 17983909 (-)
AMCG00018682 NA coding upstream 178554 17984479 ~ 17985764 (-)
G117933 NA non-coding downstream 44096 17760550 ~ 17761560 (-)
G117916 NA non-coding downstream 69332 17734676 ~ 17736324 (-)
G117888 NA non-coding downstream 220558 17584751 ~ 17585098 (-)
G117856 NA non-coding downstream 290536 17514857 ~ 17515120 (-)
G117853 NA non-coding downstream 339222 17466134 ~ 17466434 (-)
G117978 NA non-coding upstream 59142 17865067 ~ 17866985 (-)
G117994 NA non-coding upstream 175904 17981829 ~ 18061544 (-)
G118008 NA non-coding upstream 493923 18299848 ~ 18300107 (-)
G118010 NA non-coding upstream 508074 18313999 ~ 18314242 (-)
G118101 NA non-coding upstream 846841 18652766 ~ 18659398 (-)
G117899 NA other downstream 201808 17603356 ~ 17603848 (-)
G117823 NA other downstream 549385 17226090 ~ 17256271 (-)
G117784 NA other downstream 796355 17008898 ~ 17009301 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 2287341 15498662 ~ 15518315 (-)
G117377 NA other downstream 3067344 14736138 ~ 14738312 (-)
G118075 NA other upstream 660443 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 732493 18538418 ~ 18547368 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 939209 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 1031829 18837754 ~ 18845144 (-)
AMCG00018723 NA other upstream 1232632 19038557 ~ 19047717 (-)

Expression


Co-expression Network