AMCG00018682


Basic Information

Item Value
gene id AMCG00018682
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17984479 ~ 17985764 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018682
CTATTTTAGCCGCTCTGTTTGGATGAAGATGTGGGCCTTTCTGCTGTGTGCTCTGGTCTTATCTGCTACAGGAATCCATGCAGATAATAGTTCAGAAACGAATGTTAAAGAAAAGCTGGACATTGCCTGGGGAAAACTGATTGCTCCCAGCATAGTTGGATGATCAATCAAGAAAATGCCTGAGCTTCGAGAGTTTCTGATGGAGCGGTGGGCACTATACCATAACCTAGAATATGACTCCCAGGATGCTGCAGAACCACAACTTCTTCTCTACAATGACGAAGGAGAAATTGTGAAGACTGTGGCAGTGAAGGACATGAAAGCAGACGAGATCAGCGCTCTCCTGGACTCGCTGGGCTTCTATAAAAGGCTGCAGAAAGGGGAAGAGGTTCCCGAGGAATTCCAGCACTTCCCTCTGCAGGCTCCCAGAGACGAGCTTTGAGGACGTCTAGTGGTCAGCTCTGACACTGCTGCAGGAAGTGAGAATGATGTCTGTGACTGAAAGGCAAACCATGCCTGGTTTCAGACGGAGGACAAGAGTACTTCACGCAGTACAAAGCAGCTGAAACCATTCAATGTCTAAAGGAGaattatgatgataattaaacatattaacaataataa

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018682 True 624 mRNA 0.46 4 17984479 17985764

Neighbor

gene id symbol gene type direction distance location
AMCG00018684 NA coding downstream 570 17982629 ~ 17983909 (-)
AMCG00018680 NA coding downstream 6259 17973435 ~ 17978220 (-)
AMCG00018676 fbxo21 coding downstream 144343 17834395 ~ 17840136 (-)
AMCG00018674 NA coding downstream 151874 17823669 ~ 17832605 (-)
AMCG00018677 NA coding downstream 178554 17805656 ~ 17805925 (-)
AMCG00018683 NA coding upstream 15979 18001743 ~ 18021214 (-)
AMCG00018690 NA coding upstream 543658 18529422 ~ 18532311 (-)
AMCG00018689 LOC106585651 coding upstream 549761 18535525 ~ 18535910 (-)
AMCG00018688 NA coding upstream 571577 18557341 ~ 18562421 (-)
AMCG00018696 NA coding upstream 587378 18573142 ~ 18575337 (-)
G117978 NA non-coding downstream 117494 17865067 ~ 17866985 (-)
G117933 NA non-coding downstream 222919 17760550 ~ 17761560 (-)
G117916 NA non-coding downstream 248155 17734676 ~ 17736324 (-)
G117888 NA non-coding downstream 399381 17584751 ~ 17585098 (-)
G117856 NA non-coding downstream 469359 17514857 ~ 17515120 (-)
G118008 NA non-coding upstream 314084 18299848 ~ 18300107 (-)
G118010 NA non-coding upstream 328235 18313999 ~ 18314242 (-)
G118101 NA non-coding upstream 667002 18652766 ~ 18659398 (-)
G118100 NA non-coding upstream 670701 18656465 ~ 18657534 (-)
G118115 srsf9,LOC107692023,LOC107560829,LOC105025588 non-coding upstream 747324 18733088 ~ 18733820 (-)
G117899 NA other downstream 380631 17603356 ~ 17603848 (-)
G117823 NA other downstream 728208 17226090 ~ 17256271 (-)
G117784 NA other downstream 975178 17008898 ~ 17009301 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 2466164 15498662 ~ 15518315 (-)
G117377 NA other downstream 3246167 14736138 ~ 14738312 (-)
G118075 NA other upstream 480604 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 552654 18538418 ~ 18547368 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 759370 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 851990 18837754 ~ 18845144 (-)
AMCG00018723 NA other upstream 1052793 19038557 ~ 19047717 (-)

Expression


Co-expression Network