AMCG00018695


Basic Information

Item Value
gene id AMCG00018695
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18578127 ~ 18586515 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018695
TCGCAGATTGCAGATGAGCAGAAGACACAGATATAGCTACAATCGTTACCAACAATCGGTGTTTTTTTATCAGTATTAGGCTTtagtcattttttaattaatgcattcaattaaataaacatatcagCTATAGTCGGTGAAGTCTGAGGGGGGGAAATGGCAAAAGATTCCAATGAAACGGAATATCAGCCTTTGCTAAAAGGTGTAAAAACTCCAAAGAAAGTTCTGGTTCCTAACAAAACCCTTGTGCTGGCTGTTTGTGCAGCTTGCATTGGAGGGACCTTTCAGTATGGATATAATGTATCCATCATCAACGCTCCTACCAAGCCCATACAGAGTTTCATGAATGAGACGTGGTTTCAGCGATATAACACCTACATGAGTGAAGAATTGCTGACTCTCTTCTGGTCTTCCATCGTCTCCATTTTCACTCTCGGTGGTTTCATTGGGGCGTCTATTGGTGGAGCCCTTGCTATTAGGGTGGGGAGAAAAGGATCTCTACTGGTAAACAATGTATTTGCCTTGTTAGCTTCATTGTTAATGGGCCTGAGCTACCCCACTGGAGTGTTTGAGCTTTTAATCATTGGACGCTTTCTTATCGGGCTAAATGCAGGAATTGGCATCTGTGTTCAACCTCTGTACCTGGGAGAGATTGCGCCTCGATCTCTGCGAGGAGTAATGGCCATGGGAACATCTGTGTTCATCACAGGAGGCATATTGATGGGACAAGTCATAGGACTAAAAGAGTTGCTGGGCGGAGAGGAGTACTGGCCAATTCTGTTGTCTACCAGTTGCATTCCTGCAGTCCTTCAGTTATTGATATTGCCCTGGTTTCCCGAGAGCCCGAGGTACCTGCTGATTGATAAGGGGGATGACCTTGAATGCAAGAAAGCCCTGAAGAAACTGCATGGCCCTGATGACTGCCACGCTGAGAGGGAAGACATGGAGAAAGAAAGGGTCACAGCCCTGGGCACCAAGGCTAAAAAACCCTGGGAGGTAGTGATGGACCGCAGCCTGCGCTGGCAGCTCATTTCAGTGATCATCTTGAACTCTGCTCAGCAgctcaatggcatcaatgctATTTATTTCTacgcaaattacatttttacccGAGCTGGAATTCCAGAGCCCAGAATCCCCTATGTCACAATCGGCACCGGGGCCTGTGAGTGTCTGACTGCATTGACCTGCGGCATATTAATTGAATCTCTTGGAAGAAGGGTGCTGATAATTGGAGGCTATTCGCTGATGACCCTGTGGTGTGTTTGTCTAACACTGACACTGAGTTTTCAGGATGCCAGCCCTTGGGTACCTTATCTAAGCatggtctgtgtgttttgttttatcctgAGCTTTGGATTAGGACCAGGTGGCGTGACCAACATTTTAACCACAGAGCTGTTTACTCAGACAGCACGCCCAGCAGGCTACATCATTGGAGGATCTGTAAACTGGCTTAGCTTTTTTTTGATAGGAATGATTTTCCCATTCATTGTGAATGGCCTTCAGCAGTACTGCTTCCTGGTGTTCCTGGTTATATGTTCCCTGGTGGCACTGTACATTTTCTTCATCGTTCCTgagaccaaaaacaaaaccttcctTGAAATCCAACAGGAATTTCAGGCTCGTAACGGTATCAAACTTgatgaaaataacaaaccaGAGGTATTGCTGTCCACACCACTGTGAAAATATTAACTACTCTCAATTCTGTGGTGGCTTCAAATAATGTAAGGTTCTTTTTGGTTAGTGCAATGGCTCTTATGGCAAAACCCCTATACACAACATCTGTTAGACATTTTAACAaccaaattcaaataaatgagaaacatttccaaattggaaaaaacaatgttttgtgcGTAATATTGTATTGGGGTTTGAGGAGATGGTCACCTGTACGAACAGTAGGGATTCTTTAAATGTAGATATATTTGTGCCCAATAGTTCAATACCTTTGTATCAGATAATGTCAGTGCTTCAATTAGTGattcacagaaaaataaaaatgtatatacagtacactaatatatttagatttgacaTGTCCCATTGGAAGAACTAGATTAGAATAGTGGCTTTTCTGTTCAAGGTACTCAGGGATTATACTGAACTGCATCAGAGACTAACGCACTGACTGAATATATAGAAAAGTGGATAAATGGACACACTGAGTAAGATTAACAAATCTTAGAataacgcatttcaaaaaagtttttgatagaAGTATTACAAATAGATATATGTGGTTATTAATGGAATTTCAACTAAAGGTCAGGAGGAAGACAACCCCCAATCAGGCTTCACTCCAAGCCAAGGCTTTGCTCTGAACCAATGAGATATTCccttacatacacacactatcaTAAGTACCACATGACAAGTTCTTTGCGTCAGTAGCTCACTTCCATCGCACCTAAACACTGATCAACAGCCCTCCGACTCCCCCAGTCTCaacctttgcagcagctccttgatTCCAACCACCAGGTGGTGGGGTTTATGATGACCTCGTCCTCACGGTTAGGCTTCGTCCCCTCAGCCATAAGAATTAAGGTCAAAATATCCCCATTACTTCAATCATTACTTTCTCCACCTACTTCCATA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K08148 SLC2A11, GLUT11; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018695 True 2607 mRNA 0.43 12 18578127 18586515

Neighbor

gene id symbol gene type direction distance location
AMCG00018696 NA coding downstream 2790 18573142 ~ 18575337 (-)
AMCG00018688 NA coding downstream 15706 18557341 ~ 18562421 (-)
AMCG00018689 LOC106585651 coding downstream 42217 18535525 ~ 18535910 (-)
AMCG00018690 NA coding downstream 45816 18529422 ~ 18532311 (-)
AMCG00018683 NA coding downstream 556913 18001743 ~ 18021214 (-)
AMCG00018694 NA coding upstream 19733 18606248 ~ 18634128 (-)
AMCG00018699 NA coding upstream 55984 18642499 ~ 18643149 (-)
AMCG00018704 NA coding upstream 74739 18661254 ~ 18663368 (-)
AMCG00018705 pes1,LOC106585655,LOC102794482,LOC101476782 coding upstream 88274 18674789 ~ 18683596 (-)
AMCG00018706 pole coding upstream 114417 18700932 ~ 18718832 (-)
G118010 NA non-coding downstream 263885 18313999 ~ 18314242 (-)
G118008 NA non-coding downstream 278020 18299848 ~ 18300107 (-)
G117994 NA non-coding downstream 516583 17981829 ~ 18061544 (-)
G117978 NA non-coding downstream 711142 17865067 ~ 17866985 (-)
G117933 NA non-coding downstream 816567 17760550 ~ 17761560 (-)
G118101 NA non-coding upstream 66251 18652766 ~ 18659398 (-)
G118100 NA non-coding upstream 69950 18656465 ~ 18657534 (-)
G118115 srsf9,LOC107692023,LOC107560829,LOC105025588 non-coding upstream 146573 18733088 ~ 18733820 (-)
G118147 NA non-coding upstream 296544 18883059 ~ 18885984 (-)
G118223 NA non-coding upstream 591966 19178481 ~ 19178740 (-)
AMCG00018687 NA other downstream 30759 18538418 ~ 18547368 (-)
G118075 NA other downstream 103882 18466368 ~ 18474245 (-)
G117899 NA other downstream 974279 17603356 ~ 17603848 (-)
G117823 NA other downstream 1321856 17226090 ~ 17256271 (-)
G117784 NA other downstream 1568826 17008898 ~ 17009301 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 158619 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 251239 18837754 ~ 18845144 (-)
AMCG00018723 NA other upstream 452042 19038557 ~ 19047717 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other upstream 881253 19467768 ~ 19498979 (-)
G118434 NA other upstream 1401159 19987674 ~ 19988168 (-)

Expression


Co-expression Network