AMCG00018723


Basic Information

Item Value
gene id AMCG00018723
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19038557 ~ 19047717 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018723
ATGCTGATTGGACAGAGTCGGCCGGAGTACCGACGAAGTCAGGGGTTTGTTTGGATCCGATCATCTGCAATGCTTCAGGAAGAGTACATAGTGTCGGCCCCTGGGAAAGCTATTCTCCACGGAGAGCATGCTGTGGTGCACGGAAAAGTGGCACTGGCTGTCAGTTTGAACCTGCGGACGTACCTGCACCTCCAGCCCAACTCTGCTGGGAAAGTAACTATCAACCTCCCCAACATCTACACCTTCCTCAGCTGGGACGTCTCCTCTCTGCAGGCCCTGATCCCTGATGGCACAGGTGATCTGAAGAGCACCAGTGAGCCAGACCCTGAGTTTATCCAGAAGTTGCGAGACTTTGCTGGTCTGGCAGACCAGTCCACCGACACTCGCAACCTGGCTGTCCTCGCCTTCCTCTACGTCTACCTGTCTGTGTTCTCTAGTTCCAGGGCCCTTCCCAGTGTGACCATGTCCGTGTGGTCAGAGCTGCCCACCGGTGCTGGCCTGGGCTCTAGTGCTGCCTactctgtctgcctctctgcGGCCTTGCTCTCTGCCCGGGGAGCTGTGACCTGCCCCTCGTTTGGCACGGGGCACACAGCCAGGTGGCGTATTGCGATACCATGCAGGGAAGATCAAGCCATTGAGAAGGAGGAAAACGCACGGGTGAGAATTTATGCGCAGTTCGTCCGAACCAATTCAAGTGACAAATTCTTCTTGGTGTTCGTAACAGCTGTTCCAGTGTTGCGAATTCTGCTGACGAACACCAAAATTCCCCGCAGTACAAAGGTGCTGGTTGCTGGAGTGAGGGACAAAATTGACAAGTTTCCTGCCATAATGAAGCCAGTGCTGGAATCAATAGATGCCATTTCCTGTACCTGTGAGcgaaatctaattaaaatggcCAGTGAAGCCACGCCCGAGCACTACACTGTGTTAGAAGAGCTGATTGACATTAACCAGCACCATCTGAACGTGATCGGTGTAGGGCATCCCTCCCTGGACGCGCTGTGCCAGGCCACCCTGGCACACGGCCTCCACAGCAAGCTGACCGGGGCTGGGGGAGGAGGCTGTGCCATCACTCTCCTCCGACCAGACACTGACTGCTCAGTAGTACAGAAATCAGTAGAGGaactgcaggactgtggctaTGACTGTTGGGAAACCAGCATTGGAGCTCCAGGTGTGCTCCTGCATTCGCCCTCCTCCCTGAAGGATGGAGTCTTACAGATCTTAAACAGTTACTGAAGAGACTGTCCATACAACGGCTTTTGTTGGATTTGACCATTGACAGGCTTTGTTTTTGCTCCCTGCTGCCAGTACCCTTCATTTTGACATGTGCCCCAGTCCCGAGTGCGGTTAATCTACTGTCAAGTGGATATGACTGAGAACTCCACTGGTTTGTGATTGGGAATTGGATGACAGAGGCTTTCGCGTGAACTGTCCTTATTCTGCACCGCTTCTCTTGGTTTGCCAAAGAGTACTTAAGTCACAGGCCGACCACACAACAGGGGAAAGAGCAATATCTTTTGTTGGCAGGCCAAGTGAATGCCTTGTATTTATCTAAATCAGAACTGCAGAGACTTAAAAAGATAGAGGTAtgcaaaggaaaggaaactaTGAGAGAGGCACGCAACTTATCTCATGCTCTTAGATCAGCAAACTGAAAATCAGTACGTGTCATTCGCTCAAGTCGATGTcgtaaatgtttaatttccacCTTTTTTGAAAGTCTGCTCGCCGGTGTGTCTTCTCCTGTTGACTGAACTGGGACAGACAGACTGTAATTTCCTGTGGGATTCTGGGAGATTAGCAGTCAGCTGTGACACAGCAATAAATAACAAGAGAAATTCAAACAAATGAAGAATTAatgctgatatttattttccatttcagatgTTTATGTGTAAGCATCTTGATAACCATTAGATCCGAAAAGAAATGGCACAGTGACAGATGATGCTAAATCCCGTTGTCCTCGTGCGTTGGAAGTTCACTGTAAGGACAAAAGTGGTTGACATCGTCTTTCAAATTACATGCAACTGACTTTACTCTCCAGTAGGCGGCAGTGATACCTCTCTCAACTTCACACCAGTCTGGATATCATTGAGATAACAGAAATCTACCTGCTGCCATATATTCATTTCTTTATCATTCCGTAattgggtatttatttatttattacaatgcattttaaccTGTTCAACTGAGTGTAATCCTTGATGTGTTGGGCTTGTGTGCTGTAATTATAATTACTGCACAATCAACATTCTAACTCGCATTAAATTACcattatatttactttaaa
>TU148096
GATGTCAATACTTTAGGTCCCGGTTTGAAGTGATATCTACGGCCAAAACAAACtcccaaaaaacaacattaacagaTTTGACAAATGTTTAAGACTGGAGGACGTCCTAACATTTCAATTGGATAACCCTATCTATGCCCTGTCCCACATTGCAATTGCAGGGTGTGCAAATTAGAGGGGCATCTTTTCTGTGCAGCCGGAGTACCGACGAAGTCAGGGGTTTGTTTGGATCCGATCATCTGCAATGCTTCAGGAAGAGTACATAGTGTCGGCCCCTGGGAAAGCTATTCTCCACGGAGAGCATGCTGTGGTGCACGGAAAAGTGGCACTGGCTGTCAGTTTGAACCTGCGGACGTACCTGCACCTCCAGCCCAACTCTGCTGGGAAAGTAACTATCAACCTCCCCAACATCTACACCTTCCTCAGCTGGGACGTCTCCTCTCTGCAGGCCCTGATCCCTGATGGCACAGGTGATCTGAAGAGCACCAGTGAGCCAGACCCTGAGTTTATCCAGAAGTTGCGAGACTTTGCTGGTCTGGCAGACCAGTCCACCGACACTCGCAACCTGGCTGTCCTCGCCTTCCTCTACGTCTACCTGTCTGTGTTCTCTAGTTCCAGG

Function

GO:

id name namespace
GO:0044237 cellular metabolic process biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00869 E2.7.1.36, MVK, mvaK1; mevalonate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018723 True 2302 mRNA 0.48 12 19038557 19047717
TU148096 False 619 TUCP 0.51 4 19045682 19047577

Neighbor

gene id symbol gene type direction distance location
AMCG00018718 NA coding downstream 102241 18924508 ~ 18936316 (-)
AMCG00018714 NA coding downstream 162941 18869934 ~ 18875616 (-)
AMCG00018713 LOC106585677,LOC105014449 coding downstream 262153 18750445 ~ 18776404 (-)
AMCG00018707 gatc,LOC102777901 coding downstream 301225 18736405 ~ 18737332 (-)
AMCG00018709 NA coding downstream 312616 18723698 ~ 18725941 (-)
AMCG00018722 NA coding upstream 4221 19051938 ~ 19056035 (-)
AMCG00018721 ube3b,LOC106585662,LOC106580104 coding upstream 11060 19058777 ~ 19071999 (-)
AMCG00018728 NA coding upstream 31132 19078849 ~ 19088464 (-)
AMCG00018727 acacb coding upstream 70579 19118296 ~ 19148083 (-)
AMCG00018729 ung coding upstream 101508 19149225 ~ 19153064 (-)
G118147 NA non-coding downstream 152573 18883059 ~ 18885984 (-)
G118115 srsf9,LOC107692023,LOC107560829,LOC105025588 non-coding downstream 304737 18733088 ~ 18733820 (-)
G118101 NA non-coding downstream 379159 18652766 ~ 18659398 (-)
G118100 NA non-coding downstream 381023 18656465 ~ 18657534 (-)
G118010 NA non-coding downstream 724315 18313999 ~ 18314242 (-)
G118223 NA non-coding upstream 130764 19178481 ~ 19178740 (-)
G118238 NA non-coding upstream 173580 19221297 ~ 19221632 (-)
G118239 NA non-coding upstream 176955 19224672 ~ 19227434 (-)
G118266 NA non-coding upstream 285591 19333308 ~ 19335777 (-)
G118289 NA non-coding upstream 412209 19459926 ~ 19460509 (-)
AMCG00018715 ankrd13a other downstream 193413 18837754 ~ 18845144 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other downstream 291737 18745134 ~ 18746820 (-)
AMCG00018687 NA other downstream 491189 18538418 ~ 18547368 (-)
G118075 NA other downstream 564312 18466368 ~ 18474245 (-)
G117899 NA other downstream 1434709 17603356 ~ 17603848 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other upstream 420051 19467768 ~ 19498979 (-)
G118434 NA other upstream 939957 19987674 ~ 19988168 (-)
G118477 NA other upstream 1030371 20078088 ~ 20079882 (-)
AMCG00018788 LOC107579725 other upstream 1391242 20438959 ~ 20458617 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other upstream 1441218 20488935 ~ 20523819 (-)

Expression


Co-expression Network