AMCG00018747


Basic Information

Item Value
gene id AMCG00018747
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19655440 ~ 19674082 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018747
GGTGTTTACATGGTCGCAACGTGTGCATGGCTGATATTTCTCTGTCATctatgattttatatttatatcagcAAACATGTTTCTGGACGAATCGGCTCAGAAACAAGCTGACGCCTGTGTGACCTTCTACAGGAGCATAGAGAAACTACCTGTAGATGTTAAGAATAAACTGCTTGAATTCATTGCAAAACTGCAAGAATCCACCAGGAGCTCCGGGAAGCGCTGCAAAGAAAGACGTCTGGAGGAGGCCCTGGAGAAGCTGAGGGCTGCCTGTGAGCTGGACTGTTGCAGCTTGCTCCAGGTCCGGCACGTTCTCCCGTTGGTGCGGCTGGTCCTTGCCTTCCAGCTGGAAACACTCGGCAACTCCACTGCCTTCCGCAAGCTCGACCAGATGATGATTAAGCTGTCAGAGATCAACCAGACCCTCGTTTTTGAGGAGGTCCAGAAGTGTCTGAGAAGCACAGTAGACAAGGATGAGATTTTATCATTTAAGGACCTCCAAATAGTATCCATGTTTCTGGAGGACAGCTCTGTGGGCCGTCAGTTGTTTAGACAAGCCTTTCCATCGCTGCTGTCCAAAGTAGCCGAGACCTTCCCAGTCATCATGGACCAGGAAGCAGCTAGAAATGGGGAGTGGTGCTATCTCACAGTGAAGGTTTGCCTACAGATTTTCCAGCTGTTGCCCACTGGTTATAATGAGAGTAACGCAGCTACGGAGGTCATTCTGCAACATCTGCTGCTCATCATCCTGGGGCAGAGCTCTAACCGGGACACTCGGCTGCTGGCCGGCACTGCTTCTACAATGGCGATTAACACCGCACCGCAGCCCCTGGATGGCGTGGAGGCCGTGCTGAGTTTCCTAGAGGTAGCCAGCACAGGACCGTCTCGGCTGTGCACGGGCAGTGTGACCGTGGCCTGTGGGGTTCCGAGCCGGGACGGGGTGAACACGCTGGCGGTGACCAGGGGACTCCTGACCTGCtgcaggaaggacatcctactCAGCCCAATGGACAGGGAAGGGACCTGCCTGTTGTTAGATGGTGTGTTTCCTGTTGTCTCTGCCTTGTGTGAGGAGAGCCTGGACTGCCATTATTACATCTTCCAAGTGCTTGCCCTGTGGCTGAAGTGTGTGCGGGAGAATCTGGAGGAGGTGTGGGCAGTGACAGGAGTACCCCTGCTCTCTGACCGCTACCGCCTGAAGCAGCGCCTCACCCAGCTCATCTGGAACAGTGCAGAGAGCCCAGTGGAAGGCGTCTCTGAGTTTGTGCACAGCCTGTTCCGTCTGCTCTTGGAGATTTACGAACTGGAGTGCGAGCGCTTTCAAGACCCAGAGAGGCCTCTTTACATGTCCTTGCTGCACAGAGTCACTGCTCTGCCCTGGGAGGCCAAATCAAAGTACTTCCCCCTGTGTGCTCTGCTCCCCTACATTGGCACAGACAAGGTGCTGGAACATTTCCCCATGCTCCCCTGCCACCTCCTAAGCTGCCTCTCCACCAATCACCTCTCTCCCTGCGCCTCTGAGGCCTACAAGTGCATCATCAAGCACCAGAGACGGGAACTGTGTGCCAGGGCTGCCCTCTCGGAGACGGAGCTGGCGGAGCAGTGGGCCCGATGGTGGTATCCCACCCTGCTGGAAGCCCTGACCTCGGACATGACCCTCCTGCAGAACAATGCCTGCAGCTACCTCCTGCCCTGGACCCTGCGCACCTTCCCAGCTGCCTTCGAGCTCCTTCAACACCGGGTCTGCCTCTCCGGCCCGAGGCAGCTCCGAGCCTGGGCCAGCATCCTGGGCGCCCAGAGGACAGTGACTGGGTCTTCGCCCCTGCAGAGCAGCCAGCTGGGCCCGCTGCGCCTGTCTCTGGGCTCTCTGGATGACAGCGTGCGGCTGGCAGCCCTCAGCCTCCTCTGCTGCAGCCCCAAGACCAACCAGCCTCCCACGGAGCTGGAGCTCGCCGAGATGAGGGCCTTCATACCCCTGAACCTCAACTGCGACTCCTCCCCTTTCCGGCAGCACCTCCAGGCCGGGGTGAAGAAATTCCTTGTCCGAATCCGGGACAGCTGCCTGGCCTGCCTCAGAGCCAGGAAGGGCAAGATCGAGGGAGAACAGGAGGAGAAGAACTCTCTGGTGGCCCAGGGAGTAGCTTTTGTAGATTGGCTGGCACAGTTGCCCTTTTACTACCTGGCCCCGGGGCTCACCTACCAGAGAAAGAAGACTGCTCTTCTCCTGTTGTCTGCGGTGTTGGAGACATGCACCGACAGCTGGAGCCCAGACAAGAAGAAAGGCCAGCCACCAGTGAACATGTCTGCTCTGATAGGCTGGGCGAGGCAGAGAGCACAATGGGATTTCTTCTCCAGGACCAATCTGCTGGTTCTCCTCCGCTGCTTGGAAGACGGCACCAACGAGATCCGCGACTTGGGCTCCGAGCTGCTGCTGCGATTCTTCCCGCCTCTGCTGCCACAAGACCTGCGCCCCGGCCTGTTCGAGCGTGCACAGAAGCTCATATGCTGCCCTCGTGTGCAGGATGCTCAGGCAGGGGCACTGATGATGAAGATGGTCCTCCAGACGTCAGAGGATCTTTCTTCAATCTTGAAGATCGACTGCAAGGCAGAGAGTGACCAGGTGCCCATGCAGGACGTGAATACAGTGTCTCTGGTCCTGTTTCTGCTCCAGGAGCTCCAGCAACACCACCTAGCTGCTGAGGAGGACATGCTGAACGCTGCCAGAACCAAACCAATCCATGGGGTTCTCGTGGCTCTGCAGAGGTGTCTCCTGGATGTCCCAAATGCTTGGATTTCAATGCAGACAGCTGACATCAGCCCCCGTGGGTCAGAGGTGATTCCCAGGCTGGTGGAGACCTTGGAGAAGATTAGCATGTTCCTCCTGGGGGTGCTGTATGGAAACCAGGGGGGATCTTGTGAGGAGCAAGAAACGCCCCCATCGTTCTGTGACATGGGGAACGCTATCAACTGGGTGATCGCGCAGGGTGGGGGGCTGGCGGATGGAGAGGGGGACGACTGTGTGCTGCTGTCAGAGGAACACAGCCTCATTATGACTTGCTGTTGGGTCTCCTTGAAGGAAATTGGCATTTTTCTGGGCTCACTGGTGGAGAAGGTGTTCTTGGTGGCGCCCTCTGGTGCTGCGACACAGTCCCTGCTCACCATTGAAGATCTGAAGAAGATTGCCAAAGTGTTCAAGGATATTCTTCTCAAGTGTCGCCACTGGGGAGCTGTGGAGGGGTGCTGCGCCGGCTTCACTAAATTTTGTGCTGTTCTTCTGAATAACCCGAACCCAGAGCTACAGGCGATCCCTACAAGCATGCTGGAGCAGGGGTTGTTGGTGCTGCAGACGCCCCGCAGCACGTCGGTGACCCGGCGGGCAGCAGGGCTCCCCATGCTCATCCTCTGTATCGTGTGTGCAGTCCATGCCCTCCAGGCCGTGGTGCGATGCTCTGGGCTGGGCGTGGCCGTGTTACAGTTTGCTCCTGCCATGACCATGCTGTCTCTGAACGCCCTGAGTTCCCCCTGCTGGGCAATGAGGAATGCAGCCCTCCAGCTCTTCAGTGTGATTGCCACTGGCATGCTCTCAGTCAGTGTCTTTGTTCCTCCAGGTTCTCTGTGCTCTCGGATGCTGGGCCAGCGGCCGAGTGGAGGGGACGGCTCTGTGCGGCACACCATGTCCCCCCCTGCCTTCTTCACAAACTACCCCGCGCTGCAGGCCTTCCTCCTGGGACAGCTAGAGGGCGCCGCCGAGTCCCTGGGCTCACCAGGAGAGGGGAGACTCCACCTCCACCCCTCCCTGCATTCTGTCCTCGCCCTGCTGGCAAAACTGCAGCCTGGAGTCCACGATGAAACTGGATTGGCAGTGGATACAGTGAATGTCTTGGTGGAGAAGTTTGAATCCAGGCTGTGGTTGATCACATCGACCCCCAAGTGCCCCTTAATCGGGTCGGCCTACTTGTGTGTTGCGGCCCAGCTGGCGAGATTCTGCACTCGCAGCTTCCTGGATCAGCTGCACACCAGCCTAATGATGGAGCTGCATGGCCCAAGGAACAGGCTGCAGGTGGGCTTGGCAGTATTCTCCCAGAATGCTGTGCGCTTCCTCTGTGATGAAGCCGTGAGAGCCGGAGACCCTGAGATGGGGGAGCAGGTGTGGCGGCTGCTTTCTGTGGGAGACCCTGACGTGCAGTTGGCTCTGGTCCGCTGGGCAGGGGATGGACAGAGCTGGAAGGACACTGACCTGCAGCCAGTTCTGGACAAAGCTCTGAGGGACAATCTGAAGGCCTTGCTGGAGAGAGGTAGTGTGGAGTACAGGAGAGCGTACCTGGAGGCTTTTGTGGCTGTGGTGACCACAGGTGCAGACAGCCCAGACCCCCAGGCTGCCCTTCCCCCCGGCCCGACCCAGTGGATCTGCACTGAGCTGCTATTGGACCTTCTAGAGAGCCGGTCTGGTGGGCCTGAGCTCCTCTCTCAGCTTCTCTGTGCTGTTGGTCTTCTACTGAGTGACAGCCCCGCAGATTCCCTGACCGAGCGCTGGTGCGGGCTGCTGGAGACTCACAGGACCCCTGAGACCTCCGACTCCCTAAGGCTGGGCTGTGCGAAGGCCCTGCGGCTGGGGGGGGCTCCCCTGGTGCGCAGGGCACTGGCAGGCCGGGCCCCGTGCCCCGCTCTCTGCGCCAGGTTGATCAATACTGGCCTCTACCTGTTGCAGGACGAGGATCAGCAGGTGAGGACGGAGGCCGCTAGGTTCGGCTCCATGGTGACATTCACCAAAGACGGGCAGCCCTGCTTTGAGATGCAGGCGAACCAGGTGCTGCTCTCCCTCCTAGACCTGCTTCTGGAGGAATTCTGGGATAGGCCGGACAGCCTGGAGGCCTTGCTGTCTCACCTCCCACCACCAGACTTGGACGCAGTGCTGAGGGACACCCAGGACACGCAGAGCCTCAGTCTGTATGAGCAAGACGAGCCCAACGTGTTTGCAGAACCAGCCGTGATGTCGCAGGTCCTGCTGCCCTATCTCCTCCGGCTGGCTGACCGGGCGCGCACCTCCGCCTGTGTCAGGGAGCAGCTGAGCCGCTGGGCGACGGACAGTACGGCACAAATAATGACCAGCTTTCACCGCTGCCAGGAGCTGCTCACTGCAGCTGGCCTTTTCACGAGGGCTGCTCTCCTCCTGCGCTTCCTGGAGTCCGTGGAAGACCCCCGGCTTCCCTGCCCAGCCCCGTTCCTGCGGTCCCAGCTGCAGGACACTCACAGGCTGCTCTCTCGGTACGGCATCCTCACTCCCGTGGAACTGACTTCACTCTTACTGACACCAGTCAAACTCCCCCTGGAAAATCTGCAGATCTGGTGa

Function

GO: NA

KEGG:

id description
K24169 THADA, ARMC13; thyroid adenoma-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018747 True 5350 mRNA 0.59 30 19655440 19674082

Neighbor

gene id symbol gene type direction distance location
AMCG00018748 NA coding downstream 6174 19638160 ~ 19649266 (-)
AMCG00018749 LOC107741213 coding downstream 52154 19580402 ~ 19603286 (-)
AMCG00018741 ficd,LOC107741218 coding downstream 305540 19346052 ~ 19349900 (-)
AMCG00018738 iscu,iscua,LOC100705178,LOC102784710,LOC103373105,LOC106568219 coding downstream 322198 19327981 ~ 19333242 (-)
AMCG00018733 dao coding downstream 460232 19181739 ~ 19195208 (-)
AMCG00018750 NA coding upstream 11283 19685365 ~ 19686363 (-)
AMCG00018755 ggt1a,LOC107753164 coding upstream 104687 19778769 ~ 19792342 (-)
AMCG00018756 NA coding upstream 190910 19864992 ~ 19871894 (-)
AMCG00018761 LOC106579932,LOC105014887 coding upstream 220768 19894850 ~ 19913272 (-)
AMCG00018760 NA coding upstream 249288 19923370 ~ 19957267 (-)
G118305 NA non-coding downstream 76408 19577014 ~ 19579032 (-)
G118299 NA non-coding downstream 123297 19499525 ~ 19532143 (-)
G118289 NA non-coding downstream 194931 19459926 ~ 19460509 (-)
G118266 NA non-coding downstream 319663 19333308 ~ 19335777 (-)
G118239 NA non-coding downstream 428006 19224672 ~ 19227434 (-)
G118440 NA non-coding upstream 320061 19994143 ~ 19994359 (-)
G118466 NA non-coding upstream 359128 20033210 ~ 20035657 (-)
G118469 NA non-coding upstream 382397 20056479 ~ 20057545 (-)
G118470 LOC107758578,LOC107746221,LOC107658592,LOC107689149,LOC107558115 non-coding upstream 384890 20058972 ~ 20059409 (-)
G118474 NA non-coding upstream 399269 20073351 ~ 20074161 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other downstream 156461 19467768 ~ 19498979 (-)
AMCG00018723 NA other downstream 607723 19038557 ~ 19047717 (-)
AMCG00018715 ankrd13a other downstream 810296 18837754 ~ 18845144 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other downstream 908620 18745134 ~ 18746820 (-)
AMCG00018687 NA other downstream 1108072 18538418 ~ 18547368 (-)
G118434 NA other upstream 313592 19987674 ~ 19988168 (-)
G118477 NA other upstream 404006 20078088 ~ 20079882 (-)
AMCG00018788 LOC107579725 other upstream 764877 20438959 ~ 20458617 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other upstream 814853 20488935 ~ 20523819 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other upstream 929413 20603495 ~ 20606743 (-)

Expression


Co-expression Network