AMCG00018750


Basic Information

Item Value
gene id AMCG00018750
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19685365 ~ 19686363 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018750
ATGGTTGACGCCATGGTGCTAGAGAAACATGGCTACACGCTGGGTAGCACTTTAGGAGAGGGATCTTATGCCAAAGTCAAATTGGCTTACTCTGCCAGGCTGAAGACCAACGTTGCTGTCAAAGTCGTCAACCGAAATAAAGCACCTGAGGACTTCTTGAAAAGGTTTCTTCCTCGAGAATTGGAGATCCTCCTCGTCCTCGACCACCCTAACATCGTAAAGACTTTCGACATTATTCACACATGCTTCGCAAGGGTCTACGTGGTCATGGAGCTTGGTGTCCAGGGAGACTTGCTGCAGTGGCTAAAGCACCACGGGGCTTTGGCCGAGGACTTCTCCAGAAAACTGTTCCACCAATTGTCACTGGCCATTAAGTACCTCCACGACCTGGACATCGTCCACAGGGATCTGAAATGCGAGAATCTTCTCCTGGATCAAGATCTGAATCTGAAAGTCACGGATTTTGGTTTTAGCAAGAGGTGTACCTACGAGGAGGGTACAATCCGGCTGAGTAACACGTTCTGCGGGTCAGCGGTTTACGCGGCGCCCGAGGTTTTGAGAGCCATCCCGTACAATCCCAAAGCGTCCGACGTGTGGAGCATGGGAGTGGTGCTGTACGTCATGGTGTTGGGATCCATGCCCTACGATGACTCCAACATTAAAAAGATGGTTAAAATGCAAAGGGCGCACCGAATGCGTTTCCCCAAAAGGAAACCTGTGGCACCAGCATGTAAAGACCTCATATGCCGCATTCTCAATCCCAGCGCTGCGAGCCGGATTGGAGTTGATGGCATACTGGCTCATGCTTGGCTACAGCAAGGAGCAAAAACGCAAATGGACGGACCTTCCACTTCAGTAGGGCAGACAAAAGAGGAGCCGGAGGGAGAGCAAGTCGAAACTTCACAGGGGAACAAACGAGACAAAGAAACCGAAGACCAGGGCAATGAGCAAGACTCAGGAAAAGAGGACAAGCAGCCACTGGAGAAAGCCAAGTGCTGA

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG:

id description
K08811 TSSK, STK22; testis-specific serine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018750 True 999 mRNA 0.51 1 19685365 19686363

Neighbor

gene id symbol gene type direction distance location
AMCG00018747 NA coding downstream 11283 19655440 ~ 19674082 (-)
AMCG00018748 NA coding downstream 36099 19638160 ~ 19649266 (-)
AMCG00018749 LOC107741213 coding downstream 82079 19580402 ~ 19603286 (-)
AMCG00018741 ficd,LOC107741218 coding downstream 335465 19346052 ~ 19349900 (-)
AMCG00018738 iscu,iscua,LOC100705178,LOC102784710,LOC103373105,LOC106568219 coding downstream 352123 19327981 ~ 19333242 (-)
AMCG00018755 ggt1a,LOC107753164 coding upstream 92406 19778769 ~ 19792342 (-)
AMCG00018756 NA coding upstream 178629 19864992 ~ 19871894 (-)
AMCG00018761 LOC106579932,LOC105014887 coding upstream 208487 19894850 ~ 19913272 (-)
AMCG00018760 NA coding upstream 237007 19923370 ~ 19957267 (-)
AMCG00018766 NA coding upstream 304970 19991333 ~ 20032507 (-)
G118305 NA non-coding downstream 106333 19577014 ~ 19579032 (-)
G118299 NA non-coding downstream 153222 19499525 ~ 19532143 (-)
G118289 NA non-coding downstream 224856 19459926 ~ 19460509 (-)
G118266 NA non-coding downstream 349588 19333308 ~ 19335777 (-)
G118239 NA non-coding downstream 457931 19224672 ~ 19227434 (-)
G118440 NA non-coding upstream 307780 19994143 ~ 19994359 (-)
G118466 NA non-coding upstream 346847 20033210 ~ 20035657 (-)
G118469 NA non-coding upstream 370116 20056479 ~ 20057545 (-)
G118470 LOC107758578,LOC107746221,LOC107658592,LOC107689149,LOC107558115 non-coding upstream 372609 20058972 ~ 20059409 (-)
G118474 NA non-coding upstream 386988 20073351 ~ 20074161 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other downstream 186386 19467768 ~ 19498979 (-)
AMCG00018723 NA other downstream 637648 19038557 ~ 19047717 (-)
AMCG00018715 ankrd13a other downstream 840221 18837754 ~ 18845144 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other downstream 938545 18745134 ~ 18746820 (-)
AMCG00018687 NA other downstream 1137997 18538418 ~ 18547368 (-)
G118434 NA other upstream 301311 19987674 ~ 19988168 (-)
G118477 NA other upstream 391725 20078088 ~ 20079882 (-)
AMCG00018788 LOC107579725 other upstream 752596 20438959 ~ 20458617 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other upstream 802572 20488935 ~ 20523819 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other upstream 917132 20603495 ~ 20606743 (-)

Expression


Co-expression Network