AMCG00018756


Basic Information

Item Value
gene id AMCG00018756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19864992 ~ 19871894 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018756
ATGACTCTTGCCCAACTTTTAAAGACGGTGGAAGATTGTTGTCCCCAGCTTGCTTATGCTGTACGGTTAAGgtTGCATGTGATGGCAGAAGGCGAACTGAAAGATATGGAGTCCTTTTTTGATACCCTTCCTAATCCTTTTAATGAGAGAGAATCGGAGGCATACAAAACGAGCGTTGTGGGGTTGTTTATGAGGCACATGCTGTTAGCTTTCAATAAACTGTCCTTCGGTCAGGTGTACAAGTTGTACACCGCACTTCAGCAGTACTACCACACCCCCTACTATCAGGATGCAGAGGGGAAGCCTAGGACTGCCCCCCCTACTGCTGAGGACACCGGCATGGACCTGACAAACCCAGAAGACAGTGGGGGAAAGATGGAGAAAGAGGAGCTGGACTCTTCACCAGGGCAAGCGTACTTGTtgaaaaatgatgaaaacaaagcTCTGAAGCCAGTAGCTCTGCAGGAGGAACTGAACAACATGCTGAAGTTTAACCCAGATTTTGCAGAAGCGcattatttgAGCTACTTGAACAGCATGCGTGTCCAGGACATCTACATCTCCACACACAGTCTCCTGCACTATTTTGATCGCCTCATCCTCACAGGAGGTGACAGCAAGAGCAACGGGGATGAAGGATACGGCCGCAGCCTGCGCTACGCTGCACTCAACCTTGCGGCCCTGCACTGCCGCTTTGGCCACTATCAACAGGCAGACCTGGCTTTGCAGGAGGCAATTCGCATTGCCCAGGAATCCAATGACCATGTTTGCCTGCAACACTGCCTGTATTTGGCATCTCTTGGAATTCAGTCTCTAGTTCAGCAGGGAGCGATCGGAGGCAAAACAGCCAATAAACTGATGGATGCGTTGAAGGACACTGACATCCTGCACTGGAAGCACAGTCTGTCGGAGCTGATCGACATCAGTCTGGCTCAGAAAACAGCCATCTGGAGAATGTATGGAAAGAGCACCATGGCCCTGCAGCAGGCTCAGCTACTCCTGAACATGAGCAGCCTGGAGCCGGTGAACTTCGGGGTTCACCAGAACAACACCGAGGCCTTCGCCGTGGCCCTGTGCCACCTGGCAGAGCTGCACGCCGAGCAGGGTCTGTTTGGCGCTGCCTCTGAGCTTCTGAAGCACTTAAAAGAAAGattccccccccacacccagCATGCCAAGCTGTGGATGCTGTGTGATCTGAAGATCCAGTTTGAGCGAGCCATGAACGATGGGAAGTACCACCTCTCAGACTCGCTGGTGACAGGAATCGCTGCCCTGAATAAAACTGAGGGTTTGTATAGGAAAGCACTTGTGTTGAAGGCTCAAAACCAAACCACCGAGGCCTACAAAATCCTCCAGAGGCTGCTGCTTTACTGTGAGAAATCCAAATGCACAGAAATGGTCATTCGGGTGATGCTGTCCATTGCCGAGCTGTACTGGCAGTCTTCCTGTTATGCCACGGCTCTCCCCCTCCTGCTGCAGGCTCTGGCTCTGGCCCGGCAGTTTCACCTGCAGTACCTAGCTTCCGAGACCATCCTGCACTTGGCTTTCTCACAGCTCATGCTTGGGATCCCTGAGCAAGCGCTGAACATCCTGCACATGGCGATCGAGCCCATCCTGGCACACGGCGCCGTCATGGACAAGGGTCGGGCTATGCTGCTGGTGGCCAAGTGTCAGATTGCCATTTCTGCTCCCGAGTCCCCAAAACGGAAACACCAAGCTCTTGAGGTTGCGGTCCAGAGTCTGGATGAGGCCAGGGAATATTTCGGGAAAGTGGACTGCAAGGAGAGACTACGCGACGTCTACTACCTGCAAGCCAGACTCTACAATTCCCTGGGAAAGACTGCGGAGAGGAACAAGTGCTCCATGCTCTTCCGCCAGCTCAACCAAGAGCTGCCCTCTCACGGTGTGCCCCTGATCACGCGGCTCTGA

Function

GO: NA

KEGG:

id description
K03352 APC5, ANAPC5; anaphase-promoting complex subunit 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018756 True 1932 mRNA 0.53 14 19864992 19871894

Neighbor

gene id symbol gene type direction distance location
AMCG00018755 ggt1a,LOC107753164 coding downstream 72650 19778769 ~ 19792342 (-)
AMCG00018750 NA coding downstream 178629 19685365 ~ 19686363 (-)
AMCG00018747 NA coding downstream 190910 19655440 ~ 19674082 (-)
AMCG00018748 NA coding downstream 215726 19638160 ~ 19649266 (-)
AMCG00018749 LOC107741213 coding downstream 261706 19580402 ~ 19603286 (-)
AMCG00018761 LOC106579932,LOC105014887 coding upstream 22956 19894850 ~ 19913272 (-)
AMCG00018760 NA coding upstream 51476 19923370 ~ 19957267 (-)
AMCG00018766 NA coding upstream 119439 19991333 ~ 20032507 (-)
AMCG00018765 NA coding upstream 164835 20036729 ~ 20050243 (-)
AMCG00018771 hpd,LOC107092762,LOC103375816,LOC101157460,LOC100693609,LOC103398068 coding upstream 215246 20087140 ~ 20094506 (-)
G118305 NA non-coding downstream 285960 19577014 ~ 19579032 (-)
G118299 NA non-coding downstream 332849 19499525 ~ 19532143 (-)
G118289 NA non-coding downstream 404483 19459926 ~ 19460509 (-)
G118266 NA non-coding downstream 529215 19333308 ~ 19335777 (-)
G118239 NA non-coding downstream 637558 19224672 ~ 19227434 (-)
G118440 NA non-coding upstream 122249 19994143 ~ 19994359 (-)
G118466 NA non-coding upstream 161316 20033210 ~ 20035657 (-)
G118469 NA non-coding upstream 184585 20056479 ~ 20057545 (-)
G118470 LOC107758578,LOC107746221,LOC107658592,LOC107689149,LOC107558115 non-coding upstream 187078 20058972 ~ 20059409 (-)
G118474 NA non-coding upstream 201457 20073351 ~ 20074161 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other downstream 366013 19467768 ~ 19498979 (-)
AMCG00018723 NA other downstream 817275 19038557 ~ 19047717 (-)
AMCG00018715 ankrd13a other downstream 1019848 18837754 ~ 18845144 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other downstream 1118172 18745134 ~ 18746820 (-)
AMCG00018687 NA other downstream 1317624 18538418 ~ 18547368 (-)
G118434 NA other upstream 115780 19987674 ~ 19988168 (-)
G118477 NA other upstream 206194 20078088 ~ 20079882 (-)
AMCG00018788 LOC107579725 other upstream 567065 20438959 ~ 20458617 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other upstream 617041 20488935 ~ 20523819 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other upstream 731601 20603495 ~ 20606743 (-)

Expression


Co-expression Network