AMCG00018757


Basic Information

Item Value
gene id AMCG00018757
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19729815 ~ 19732775 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018757
GACCAAGAAAAGCCGGATGGTAGAGATGAGGAAGGAGAACTGCACCTGCCCACCACTTCTGCTGAGGATGCTAGCATTGTAGACGATATTAGCATCCCCAAGAGGGCCCAAGATGGCCAGTTCTTCAAAAATACCCCGCATGGCCATTTGGAAAGAAGTTTTAACAAAAGCTGGCTGGATCAATATGAATGGCTGGAATACAGTGTGTCCAAAGATGCAgggttttgctttgcttgtctgcattttttaaaacgAGGGCACGGATGTCATGTGGGGCCAGCATTTAGTGACAATGGATTCAATAACTGGCAAAAAGCATCAGCATCTCTGAAGAGTCATCATGAAAGTGTGGGACACAAATTTGCTATGGAGACATGGAGTgagtttaaacaaaaacaggcaAACGGCTCAAAAATAGCAAACATGCTTGACAAGGGACATTCGGCGTTGGTTATGGAGAACCGAAAGTACATGAAGGCCATGGTGGAAAGCCTACGCTATACGGCTTGCCAGGGGATCGTACAGCAAGGTCACAGTGAGGGTGAGCAGTCGTCAAATAGGGGTAATTTTCGCGAGCTTCTGCGTGTCATTGGAATGTTTGATGCAACAGTCGAAAAGAAGTTAGCCACCAATTCATTAAATGCCAAATACATTCACCATGACATACAAAATGAGATAGTTACTTTAATGGCTGATATGATACGAAAAGAAATACGTGATGAGGTAAGGGATGCAGTGCACTTTGCTGTTTTGGTGGATGAAAGTAAAGATGCTAGTAAAAAGGAACAGGTTTCAGTGATCGTGCGGTATTTACAGCCAGTGTCAGAAAAAGTGCAGGAAGAGTTTTTGCATTTCACCGCAGCAGATGGGTTAGATGAGGAATCACTACTAGCCAGCATCAAGCTGCAGTCGGTAGAACTCAAGAAGCTATGTGACACTCGCTGGGCATGCCAGTATAATTCAATCTGGGCAGTCAAGAAAACTCTACCAGCAATCCGGGCTACCCTGCGTGACATCATCGGCCAGTCAAACCCGCACCGGAGGGCAGAGGCAAGAGCAATCAGTGCAATCATCGATGAGAGGTTTGATTTGCACCTTATTCTTTTCGAGGATGTATTTAGAATAACCAAGTTTATGTCTGATCAGATAAAGTCCCCCACTTTTGATCTTGTAGCGGCAGATGATCTGGCCCAGTTGTTAATGGAGATGAAATGGCACTTTTCATCAGAGACAAATTATGTACTGAGCGGTGTGACAGCCCTAAGCCCCAAACACACATATTTTCTAGACCAACAACGCATACTACCCATGGCCCATCATTATGGAATCAGTGAGGAAAACTTGTCTGCAGAGCTCTACCAGACTCGCCAGCTACTGCAAAGAAAAGAGGAACAGGGACACTCTATCACCAGCACTCAGGAGTTTCTGTACCTCATGAGGCCGTACAAAGATGCATTTATAGACATGTACAAACTCATATGCATATCTCTGACACTTCCCATCACATCAGTAAGCTGTGAGTGCAGTTTTTCTTGTCTGCGTCATTTGAAAAACTACTTGAGGAACGGGGACTGGGGACTCTCGAACCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018757 True 1593 mRNA 0.45 4 19729815 19732775

Neighbor

gene id symbol gene type direction distance location
AMCG00018751 NA coding upstream 15853 19706575 ~ 19713962 (+)
AMCG00018754 dgcr2 coding upstream 28024 19687584 ~ 19701791 (+)
AMCG00018744 NA coding upstream 45253 19678771 ~ 19684562 (+)
AMCG00018745 NA coding upstream 51876 19676622 ~ 19677939 (+)
AMCG00018746 NA coding upstream 93081 19612625 ~ 19636734 (+)
AMCG00018752 NA coding downstream 18839 19751614 ~ 19771954 (+)
AMCG00018753 NA coding downstream 73063 19805838 ~ 19851791 (+)
AMCG00018758 NA coding downstream 141553 19874328 ~ 19889731 (+)
AMCG00018759 orai1,LOC106585507,LOC108232614,LOC106568227,LOC105014888 coding downstream 226963 19959738 ~ 19966779 (+)
AMCG00018764 tmem120b,LOC107373355 coding downstream 294177 20026952 ~ 20035662 (+)
G118304 NA non-coding upstream 150784 19576964 ~ 19579031 (+)
G118291 NA non-coding upstream 249859 19479691 ~ 19479956 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding upstream 256355 19467823 ~ 19473460 (+)
G118285 NA non-coding upstream 272832 19456142 ~ 19456983 (+)
G118043 LOC104945943 non-coding upstream 1053589 18674274 ~ 18676226 (+)
G118410 NA non-coding downstream 261351 19994126 ~ 19994329 (+)
G118566 NA non-coding downstream 546513 20279288 ~ 20299830 (+)
G118572 NA non-coding downstream 569895 20302670 ~ 20302958 (+)
G118601 NA non-coding downstream 644513 20377288 ~ 20381442 (+)
G118608 NA non-coding downstream 706185 20438960 ~ 20443229 (+)
AMCG00018740 NA other upstream 247723 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 495464 19223168 ~ 19234351 (+)
AMCG00018717 trpv4,LOC106585668 other upstream 820859 18894335 ~ 18908956 (+)
AMCG00018712 NA other upstream 889720 18827597 ~ 18840095 (+)
AMCG00018702 NA other upstream 1008472 18719206 ~ 18721343 (+)
AMCG00018762 NA other downstream 238364 19971139 ~ 19974730 (+)
G118557 NA other downstream 526602 20259377 ~ 20260940 (+)
AMCG00018781 denr other downstream 639444 20372219 ~ 20374812 (+)
G118623 NA other downstream 781385 20514160 ~ 20514491 (+)
G118635 NA other downstream 859961 20592736 ~ 20593016 (+)

Expression


Co-expression Network