AMCG00018762


Basic Information

Item Value
gene id AMCG00018762
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 19971139 ~ 19974730 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018762
AGGACGTCATGCCCCATTTGAAAAAGCCTCAGAAAGCAGAACCTCTGGTAAAGGAATGGGACAGGAAGGCACAGAAAAGTGGATCGAGGCACACGGTTTATGCAGTCAATGGAGATGAATATACAGGGGACTGGCAAGACAACAAGAAACACGgaaaAGGGACACAAATCTGGAAGAATACAGGAGCCATTTACGATGGGGACTGGGAATGTGGCAAACGGAGTGGTTATGGGACATTGAGCTTGCCTCATACCGTCACTGGAGAATATGTAAAAGTTTATTCAGGAGACTGGAAGAATGATAAGAAG
>TU148369
GTGACGGGGCCTGGTTGCGGGGCTGCGCGGCGCTTCAGCGCTTTATACCGTGAAAACGCAGCAACTGACTGCAGCGGAgcaacatttaacacaactgTGTTGGCTATTCAAAGTGTTTTGACAGAGGACGTCATGCCCCATTTGAAAAAGCCTCAGAAAGCAGAACCTCTGGTAAAGGAATGGGACAGGAAGGCACAGAAAAGTGGATCGAGGCACACGGTTTATGCAGTCAATGGAGATGAATATACAGGGGACTGGCAAGACAACAAGAAACACGgaaaAGGGACACAAATCTGGAAGAATACAGGAGCCATTTACGATGGGGACTGGGAATGTGGCAAACGGAGTGGTTATGGGACATTGAGCTTGCCTCATACCGTCACTGGAGAATATGTAAAAGTTTATTCAGGAGACTGGAAGAATGATAAGAAGCACatgcccttatccagggcgacttacaacataagtgcaatacaaagtgcaagaatacagttaagtacaattacatggaaatgtaattgcatgttttcgtgttctgtgcagaatgacgTTTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018762 False 308 mRNA 0.46 2 19973578 19974366
TU148369 True 556 TUCP 0.46 4 19971139 19974730

Neighbor

gene id symbol gene type direction distance location
AMCG00018759 orai1,LOC106585507,LOC108232614,LOC106568227,LOC105014888 coding upstream 4360 19959738 ~ 19966779 (+)
AMCG00018758 NA coding upstream 81408 19874328 ~ 19889731 (+)
AMCG00018753 NA coding upstream 119348 19805838 ~ 19851791 (+)
AMCG00018752 NA coding upstream 199185 19751614 ~ 19771954 (+)
AMCG00018757 NA coding upstream 238364 19729815 ~ 19732775 (+)
AMCG00018764 tmem120b,LOC107373355 coding downstream 52222 20026952 ~ 20035662 (+)
AMCG00018763 setd1ba,LOC107689149,LOC107658592 coding downstream 83108 20057838 ~ 20083148 (+)
AMCG00018768 NA coding downstream 120395 20095125 ~ 20097742 (+)
AMCG00018769 NA coding downstream 124333 20099063 ~ 20111187 (+)
AMCG00018767 NA coding downstream 137173 20111903 ~ 20119142 (+)
G118304 NA non-coding upstream 392108 19576964 ~ 19579031 (+)
G118291 NA non-coding upstream 491183 19479691 ~ 19479956 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding upstream 497679 19467823 ~ 19473460 (+)
G118285 NA non-coding upstream 514156 19456142 ~ 19456983 (+)
G118013 NA non-coding upstream 1240327 18466368 ~ 18730812 (+)
G118410 NA non-coding downstream 19396 19994126 ~ 19994329 (+)
G118566 NA non-coding downstream 304558 20279288 ~ 20299830 (+)
G118572 NA non-coding downstream 327940 20302670 ~ 20302958 (+)
G118601 NA non-coding downstream 402558 20377288 ~ 20381442 (+)
G118608 NA non-coding downstream 464230 20438960 ~ 20443229 (+)
AMCG00018740 NA other upstream 489047 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 736788 19223168 ~ 19234351 (+)
AMCG00018717 trpv4,LOC106585668 other upstream 1062183 18894335 ~ 18908956 (+)
AMCG00018712 NA other upstream 1131044 18827597 ~ 18840095 (+)
AMCG00018702 NA other upstream 1249796 18719206 ~ 18721343 (+)
G118557 NA other downstream 284647 20259377 ~ 20260940 (+)
AMCG00018781 denr other downstream 397489 20372219 ~ 20374812 (+)
G118623 NA other downstream 539430 20514160 ~ 20514491 (+)
G118635 NA other downstream 618006 20592736 ~ 20593016 (+)
G118636 NA other downstream 618636 20593366 ~ 20594139 (+)

Expression


Co-expression Network