AMCG00018769


Basic Information

Item Value
gene id AMCG00018769
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20099063 ~ 20111187 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018769
ACCACTATCCCAGCATGCTCTGCCGTATCTAAGCAACGGGACGCTCTGCACTGGCAGTTCAGATACAGAAGTGTTGTTGGGGGTTTGCCGACTATTTTCCAAGGATTACTGAGACACCGGGAGAGAGTCATGTCACTTGCTGAAGAAGCACCTGTCATTGACCCAGTGTCAGGAGAGGAAAGCCAGCCTGTGACGGAGGATGAGCATCTCCTGGGAGAGTCTTCCCCGAGCCCTGTAGAAGACCTGGGAGGAGACGAGCCTCTAAGCCCGTCTGACAGTAAGGAAGCGCAGCAGACGgggggagaagaggagaaagaggagggtGAGAAGCTGGACACCGCAGAGGACAGCAGGACAGATGAACCCCGAGAGGATGAGAATCAAGGTAAAGTGGATTTTGGACAGGGAGACGAGGACTTGGGCGAAAAAAGTCCAAGCTCAGAAGACAAAATTGCTGAGGAGGTAAACCGGGCAGGCAAGGGTGTACTTCCCAGGCAGACAGATGCTGTGAGCAATGGCCAGCAGCCCTGTGAAGATGTGGGGCAGGCAGACCACTCCCAATTATACACTGCCTCCCCTAGGACTCTGTTCGAGGAGGAGCCCCCCGCAAGCAGAACTCACCCGCTGACTCTAGAGTGGGCTTTTGGGATAAACAAGCACCTCCCCGTGTACAGTCTTCGGGATGACGACAGGCGTGTGATCCTGTTCGGCTGTGCCCATGTTGCAGGTCACTGCAGCCCCATTTCCTGTCTTTGTGTCAGTGAGGACAGGAGGTGGGTGGCCACAGCTGACAAGGGTCAAGAGAGCTTGGTGATCATATGGGACTCGTACTCAGGGATTCCAGTGCAGACTCTGTTTGACTGCCATCCCGGGGGGGGTGTAGTGGCTATGTCATTGACAAAGGACTCAAAGTATTTGGTGACAATCGGAGCAGAAGCAATTCAGAGAGTCTGTATCTGGGACTGGACCAATGAGGTAGAAGGTCCTGTTTGCATCACAGAACTGAGTCCAGAATATGGCTTACAGAATTATGTCATTTTCAATCCGAACGACAGCTCACAGATCATCAGCAACAGCGGGAACcaggttttgttttacagctgGGACAAAGGACAGTTGGAGTACACAGCCCCACCACTTACAGATAAGTCATTCAAAAAGGTTGTGGGATCTTTCAGTCAGTCCATCTTCCATTCTGGAGGGTCCTTGGCATTCACTGCCACCTCAGCGGGGAACCTGGTGCTCTGGGACACCGTGCGCATGCCAGCGCCCCTGCGGCCCCATAACAAAACAGCCACCAAACTCATATTCCTCCAGAAGGATGGCATCACAGTGCTGACCGTGACAGATAGCTTCATAGTAACTGGTGACACAAGAGGCCATGTGAAGTTCTATGATGAAGAACTCAAGCTGATGACCTGGTATAGTCACTTCAGTCTGGAACCGGTCCGctccatttccttttcaaaagaGCCTCCTTCTCCAGCCAAACACACCACAGGATATCCAGCAGACTGCACTCTTCAAGCCAAGCAGTTTGCTGTGAGAAATTTTGTGATATCCACTACAAATGCAACTGTGATGCACATAACTGCTGAGGGAAGTGGGCTGGAGATGTTAGTGCAGGAGCACTGTGAGGCCGTGCATGCTGTGGCATGTCACCCTGCCCTGCCTCTAGTCTCCATGGCAAGCTACTGTGGAATCCTCAAGGTGTGGGACTATCAGCGCAAGAAGTGTATCTGCAGCCGGATCTTTGAGAAGGAAAAGCAAATCCAGTGCATGGTGTATGATCCTCAAGTTGGTTTTGCCAGCGGCAGTGTTTATGTGCTTGATGCCCTAACCCTGGATAACGAGTGCGCGGAACCGTTTAGATATGCCAGGGAGGGCATTACCCACATCGCCTTCTCCAGGGACTCTCAATACCTTGCCACTGCTGATGCCGGGTTCACTGTGACTGTGTTCAAGCTCTGCTCTGACAGTGGCAAGCAGGTGTGGAAGTACCTGGGCAGGCATCGCTCCCACTATCAGCCCATTCAGGACCTCATGTTCGGGCTCCACCTGGACAGCGGTCAGCCCAGGCTCCTGTCTCTGGGTATGGACAGAGTGTTGGTAGAATATGACCTCAACAGCAAGGAGGACGACTTGAAACTTCTGAGCAAAGACCGCATTGAGCAGAGTGCTGTGCCCAAGTGTATGGCCTGGTACCCACCACTCACCAAGGAAAACTTCATCCTTACTGTCAATGACCAGTACAAGATGAAGCTCTTCAACTGCACCACCAAAATGTGCAGAAAGACACTTCTTGGACCAACATATGGATCTCCTGTTGAGAAGGTGGCCGTCCTTTCTGTCTCAAGTGCTAGAGACCCCAGTGCTGGCTATCTCGCATACATTACCAAAGACAAGGTTGGCCTCCAGATCCTGCCAGTAGATGGAAATCCCCACAGGACATCTGCCCTCATCTGTCACCCGACCGGGGTCTCCAGCTTCGCCTGCTCCTTTGACAGTCGCTACATCTTCACAGCAGGGGGCAGCGACTGCACTGTGCTCGCCTGGGAGGCCAACCTGAATGCTCTGGAGGCAGCAGCGTCACTGGGTGGACAGGACCTGACCCCATTTTATGACCTTCTGGAAggggggagagatggagaattCTTCAGGGAGCTGGAGGACTATTTTTACTATTGCCAGCTGCGCAATCAGGGAATTGACTCCATGGAGACCAGACAGGTGTCTACAAGCATCCCCCTGGCAGACATCCCCTTTGTGGAGGATATGCTCAATGAAGTCAAATTCAGCAGATATGTGGACACTGGAAAGTATTTGACAGACATCGATCTGGGGGAGTTTATTAAGCTGTATGTAAACCACCGTCCAGCTTTTGGGATTTCTAGGTCCGAACTGCAGCATGCGTTCGAAGTTCTGGGCTATAAAACCGAGACGGGAGAGAAAGCAGTGAACCGAGGAGAGCTACTACAGTTACTGCAGGCCAGAGGTGAGCACATGACGGAAGAAGAGCTGGCCGAGTACCTCTCCACACTGTTGGGGCTGAATCCTGAAGGAGGGAGGTCCGAGCTGCAAAGCTCCAGCTCTCTCCTGGAGAACGCACTTCCTGAAGACATCACACTGGACACATTTCAGACCAATGTTCTGGGTTTCCCCATCTTCACACCAGAGCCCGCGCTGTCTGATGAAGAACAGACGCGCCAGGAGGCCTTCTCCTCTTAGTGCCCCTCAGAACAAACCATCAGGGACGCAAGATCATTCAGTGGCTTCCAACTTGTTGCTTCTTTTCCACTTCAGAAGATGGCACCTGTTGTGAAGAGTCTTTTTCGTTCAATATCTTGAACATGTTTTTATCTATCGCACGAATAAAGTGATTTCATG

Function

GO: NA

KEGG:

id description
K24228 WDR66, CFAP251; cilia- and flagella-associated protein 251

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018769 True 3387 mRNA 0.52 21 20099063 20111187

Neighbor

gene id symbol gene type direction distance location
AMCG00018768 NA coding upstream 1321 20095125 ~ 20097742 (+)
AMCG00018763 setd1ba,LOC107689149,LOC107658592 coding upstream 15915 20057838 ~ 20083148 (+)
AMCG00018764 tmem120b,LOC107373355 coding upstream 63401 20026952 ~ 20035662 (+)
AMCG00018759 orai1,LOC106585507,LOC108232614,LOC106568227,LOC105014888 coding upstream 132284 19959738 ~ 19966779 (+)
AMCG00018758 NA coding upstream 209332 19874328 ~ 19889731 (+)
AMCG00018767 NA coding downstream 716 20111903 ~ 20119142 (+)
AMCG00018770 mlxip,LOC107702943 coding downstream 10022 20121209 ~ 20151726 (+)
AMCG00018773 NA coding downstream 78403 20189590 ~ 20197104 (+)
AMCG00018772 NA coding downstream 91241 20202428 ~ 20207454 (+)
AMCG00018774 NA coding downstream 199971 20311158 ~ 20312556 (+)
G118410 NA non-coding upstream 104734 19994126 ~ 19994329 (+)
G118304 NA non-coding upstream 520032 19576964 ~ 19579031 (+)
G118291 NA non-coding upstream 619107 19479691 ~ 19479956 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding upstream 625603 19467823 ~ 19473460 (+)
G118285 NA non-coding upstream 642080 19456142 ~ 19456983 (+)
G118566 NA non-coding downstream 168101 20279288 ~ 20299830 (+)
G118572 NA non-coding downstream 191483 20302670 ~ 20302958 (+)
G118601 NA non-coding downstream 266101 20377288 ~ 20381442 (+)
G118608 NA non-coding downstream 327773 20438960 ~ 20443229 (+)
G118618 NA non-coding downstream 379674 20490861 ~ 20491106 (+)
AMCG00018762 NA other upstream 124333 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 616971 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 864712 19223168 ~ 19234351 (+)
AMCG00018717 trpv4,LOC106585668 other upstream 1190107 18894335 ~ 18908956 (+)
AMCG00018712 NA other upstream 1258968 18827597 ~ 18840095 (+)
G118557 NA other downstream 148190 20259377 ~ 20260940 (+)
AMCG00018781 denr other downstream 261032 20372219 ~ 20374812 (+)
G118623 NA other downstream 402973 20514160 ~ 20514491 (+)
G118635 NA other downstream 481549 20592736 ~ 20593016 (+)
G118636 NA other downstream 482179 20593366 ~ 20594139 (+)

Expression


Co-expression Network