AMCG00018773


Basic Information

Item Value
gene id AMCG00018773
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20189590 ~ 20197104 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018773
ATGAGCTCATCCACTGTTTCTACTGCTTTTGAAGAGCAGCTCCGGACTTTGTGTTTGAAGGATTTTCCTTGTGGACTTGTAAACTGGGTAAGCTGTCAAACATTTACTGAGAATGCATTGAAGCGTGTGATATGCTTTGTGTGCCAACGTTTTGCTCTGGTCTTGTTCTGGTACGAGGCAAACAGCGATCCAGAGAGGGGGAGCAGCTCGGGGCGCAGAGGGCAGGAGAAAGCCCAGTGGGAGGCCGGGAGGGAGGATCCGGAGGCCCTGATCGAGTACCTAAACAGTAACCTGTCACCATGGAAAATGGAGGCGCTCTGGAGCCCGCAGGCAGGTGGACTGAGGGAGCTGGCTGTGAGGAGTCCGGGCTGTATCCACTGGGACTTCGTCTTCGCTTACTTTACAACACTGCGCATTGTGGACAAGGGAGTGTCGGCTGTGGACGCTGGTCTGCTCAGGTTCGTCAATCTGGAGGAGCTCATACTGAGCGCAAACCGCATCTGCGACATAGACTCACATCACCTGCCCAGGACACTGAAGGTGCTTGAGCTGTGTGCCAATGCGATCTCCAGTATGAGCGGCCTCTGCAGTGACCCCCCTCCCGGGTTGCAGCACCTGGGTCTGGGCTACAGCAAGCTCTCGTCCCCCGCGGATTACAGATGCCTCACAGCAGCCTTCTGGCCCAGGTTGGTCTCTCTGGATCTGAGCTTCTCTGGGTTTGTGGAGCAGCTGGGCCTGCTGGACGCTCTCGCCACCCTGCCCTGCCTCCGGAGCCTGGTGCTGCAGGGGAGCCCGCTCACCCTCACCCCCTCCTACCCCGGCTTCACCCTGGACAACCTGCCTCGCCTCACCTTCCTGGATGATGTTCGCATCTCCCCTGATGACCGGCACTGCTTCTCTGGACTGGCCAGGAGGAGAGATGTGATTGCAAATGAAGCTGTGGTGATTGTGACGATTGGGAAAATGAAGGGGGTTCCTGATCCCCATCTGCCTTCAGAAGACACCACCGTCGAGTTTCCTCTCGTCACTTACAGCTACTATGTGACCTACGAGTTCCTCGCCTGGGCTGAGGTGATGGACCACGAGTACAAAGCTGTCCATCAGACCAGGGACTTGACAGCCCTGAGAGCTTTCTTCTTGAGGGGTTTGCAAGTGACAGTGGAGGAACAGAAGGCGCTTTCATGGCCCGTCGGCCCAGCAGAAAATTCCATTGCAAAACCTGCTTCTGACAAGAGAGGAGGGGGCAAGGAAAAAGAGGAAGGCAAAGGCAAACCCAAGGACaagaagaagcagaaggagCCCCAGGTGGAGATGAGGCAGGACCCTCCAGTGCGCAGAACTCTGGGCTGTGTCAGTGTGGAGCTGCAGGCACTGCTGTGTGGAGAGAGTCACACTGGCACTGTGTGTGACTTTGGAGTCCTGCACACTCCGCACAGCTCGTTTCTCACCAGGGAAAAGGAggtcaagaaaacaaaagaagatagaaagagggaggagaagaaagcCGATTCTGGACGAGACAGCACAGCCAGTCAGAGGGCTTGCACCTCTTCCAAAGGTAAGGCCAGAACTAAAAAGAACTCTGAGGCTGACGTTGTGACAGATACAGCGCCCAGCCCACCCGATCCCCTGACACTGGAGTTCACTGTCAAGTTAGACAAATGGCTGACGGCAGCAGAAGCCTGCAATTCCCAGTATGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018773 True 1704 mRNA 0.56 10 20189590 20197104

Neighbor

gene id symbol gene type direction distance location
AMCG00018770 mlxip,LOC107702943 coding upstream 37864 20121209 ~ 20151726 (+)
AMCG00018767 NA coding upstream 70448 20111903 ~ 20119142 (+)
AMCG00018769 NA coding upstream 78403 20099063 ~ 20111187 (+)
AMCG00018768 NA coding upstream 91848 20095125 ~ 20097742 (+)
AMCG00018763 setd1ba,LOC107689149,LOC107658592 coding upstream 106442 20057838 ~ 20083148 (+)
AMCG00018772 NA coding downstream 5324 20202428 ~ 20207454 (+)
AMCG00018774 NA coding downstream 114054 20311158 ~ 20312556 (+)
AMCG00018775 NA coding downstream 125314 20322418 ~ 20348942 (+)
AMCG00018784 NA coding downstream 186025 20383129 ~ 20398337 (+)
AMCG00018783 NA coding downstream 210969 20408073 ~ 20433655 (+)
G118410 NA non-coding upstream 195261 19994126 ~ 19994329 (+)
G118304 NA non-coding upstream 610559 19576964 ~ 19579031 (+)
G118291 NA non-coding upstream 709634 19479691 ~ 19479956 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding upstream 716130 19467823 ~ 19473460 (+)
G118285 NA non-coding upstream 732607 19456142 ~ 19456983 (+)
G118566 NA non-coding downstream 82184 20279288 ~ 20299830 (+)
G118572 NA non-coding downstream 105566 20302670 ~ 20302958 (+)
G118601 NA non-coding downstream 180184 20377288 ~ 20381442 (+)
G118608 NA non-coding downstream 241856 20438960 ~ 20443229 (+)
G118618 NA non-coding downstream 293757 20490861 ~ 20491106 (+)
AMCG00018762 NA other upstream 214860 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 707498 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 955239 19223168 ~ 19234351 (+)
AMCG00018717 trpv4,LOC106585668 other upstream 1280634 18894335 ~ 18908956 (+)
AMCG00018712 NA other upstream 1349495 18827597 ~ 18840095 (+)
G118557 NA other downstream 62273 20259377 ~ 20260940 (+)
AMCG00018781 denr other downstream 175115 20372219 ~ 20374812 (+)
G118623 NA other downstream 317056 20514160 ~ 20514491 (+)
G118635 NA other downstream 395632 20592736 ~ 20593016 (+)
G118636 NA other downstream 396262 20593366 ~ 20594139 (+)

Expression


Co-expression Network