AMCG00018784


Basic Information

Item Value
gene id AMCG00018784
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20383129 ~ 20398337 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018784
TGGCCCTTCTGTGATCTGTGGATTTCTTTACAATGTATTGTCTAAATTTTTATagagtttaaaaaagaaacagtaaatcaataaatccgAATTAAATAATAGAAAGAATAATCAAGGCATAACTGGAACTCGACACGTAGGCCTTAGCATGTTTTTATTGGAGGTATTGCTATGGATCCCTGGCACAGCACTCCCATAAAACAACACAGTTTTAGCTTGGCAAAGAATTCATCCTCTCCTACACAGCTTCATTTTGGCAACGGAGCGAAAACACAGACATTATCCCCCTTGCAGGTCTCTGATGATCGGCCAGCTTCTGTTGCTGAGAGGAAGCATGTGCAGAAGACAGCGGGTGAGATTGAAGGTGCCACCATCCAGAAACAGCGTAAGGAGCTGCAACTTCTGGTTGTAGAGCTGAAGGACCGTGACCGGGAACTGAATGACATGGTGTCGGCCCACCAGAAACAGCTGCTggcctgggaggaggaccggcAGAGAGTGCTCACGCTGGAGCAGAGATGTGCACGGTTAGAGAGCGAGCTTCAGAAAAGGAATGACATCATCCGGTCCCTGACAAAGAGAATCAAAATATTGGAGGCCCAGCATCAGGACCGCCAGTCTGCTCTGACCAGCACACAGCAGCGGCTGCAGGACGTCAGTCAGCGAGAGCAGCTGACCTCTACCCAGTGCCAGGACCTGCAGGAAAGAAACCAAAGTCTTAATTCCTCCATGTTAGAGCTGTCGTCTCAAGTTGGGCAGCTCCAGGCACGTGAGCAGGAACTCGGTGCCATGCTTAAATTAAAGGACAAGGACATGACAGAAGCCACCAACCACATCATAGACCTGTCGGGTCGCTTCAGGAAGCTGGAGGCTGCGGTGAAGGAGTGTCGAGTGAGGGAGGCCCGGGCCATGAGGGAAGCGCAGGAGTACAGAAAGCGACTGCGGGAGGCTCGACACGAGGCGGACAGGCTCACAGGTGATTTACGGGAAAAGACTGCGGAGAACAATAGCCAAAAGGAAGATCTAATCCGACTCAAACAGGAAAATCAGCTTTTGCAAAATGAGCTTGCTCTGGCAGGTGAAGGTGAGCGCAGGAAGGAGGACCTGCTGGAGCTGGCCAGATCGAAACAGGAGCGCACCGAGACCGAGCTGCACTGCCTCCGACAGGTGTGTGAAAACCAGCAGAATGATCTACAGCTTCTTCATCTGAACCTGGAGAGCTCGCAGGAGAGactgcaggagagggagaggaggggctctggaggaagCCAGGGAAGATTGGACTTCAGCTCCCTTCGTCTGGCCTCTCCGGTGCTGCCGGTGGGTTCCTCCTCAGGCACAGATCAGTGGAAGCAGCGAGGGAGCCCGCGTCCAGGAAATGGCTGTCGGGAACTGGGAGTTTCACCCCCCCGTGTCACTGTAAATGGAGACCCCACACCCATCTCTAATCCTGCTGACAGTATGATAGGATCGGCCCCTCGGGGATGTGAAATGAAAGCTGTTGCTGGCTTTCCTCCTGAGGGTGAGCCGCTGTCCCCCACGACCCGCCTGCAGCGCCTGCTAGCCGAGTCCAGGCAGATGGTGATGAGTCTGGAGCACACCACTCTGCGGCCGCCCAGTCCAGCACGCAGCCTTGACAGCAGTGACAGCGGCAGGAGCATTGAAGCTTTAGACACCAAAGAACAGCTCCtgtcagaaaacacaaaagccCATCCAATGAAGAGCTCTGTGCCATCCAAGAGTCTTGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018784 True 1752 mRNA 0.53 15 20383129 20398337

Neighbor

gene id symbol gene type direction distance location
AMCG00018775 NA coding upstream 34187 20322418 ~ 20348942 (+)
AMCG00018774 NA coding upstream 70573 20311158 ~ 20312556 (+)
AMCG00018772 NA coding upstream 175675 20202428 ~ 20207454 (+)
AMCG00018773 NA coding upstream 186025 20189590 ~ 20197104 (+)
AMCG00018770 mlxip,LOC107702943 coding upstream 231403 20121209 ~ 20151726 (+)
AMCG00018783 NA coding downstream 9736 20408073 ~ 20433655 (+)
AMCG00018789 NA coding downstream 59628 20457965 ~ 20463349 (+)
AMCG00018782 arl6ip4 coding downstream 78789 20477126 ~ 20484929 (+)
AMCG00018793 kmt5a coding downstream 232666 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 243992 20642329 ~ 20645241 (+)
G118601 NA non-coding upstream 1687 20377288 ~ 20381442 (+)
G118572 NA non-coding upstream 80171 20302670 ~ 20302958 (+)
G118566 NA non-coding upstream 83299 20279288 ~ 20299830 (+)
G118410 NA non-coding upstream 388800 19994126 ~ 19994329 (+)
G118304 NA non-coding upstream 804098 19576964 ~ 19579031 (+)
G118608 NA non-coding downstream 40623 20438960 ~ 20443229 (+)
G118618 NA non-coding downstream 92524 20490861 ~ 20491106 (+)
G118620 NA non-coding downstream 101337 20499674 ~ 20500210 (+)
G118621 LOC107554528,LOC107654556 non-coding downstream 102613 20500950 ~ 20501433 (+)
G118622 NA non-coding downstream 105779 20504116 ~ 20504507 (+)
AMCG00018781 denr other upstream 8317 20372219 ~ 20374812 (+)
G118557 NA other upstream 122189 20259377 ~ 20260940 (+)
AMCG00018762 NA other upstream 408399 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 901037 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 1148778 19223168 ~ 19234351 (+)
G118623 NA other downstream 115823 20514160 ~ 20514491 (+)
G118635 NA other downstream 194399 20592736 ~ 20593016 (+)
G118636 NA other downstream 195029 20593366 ~ 20594139 (+)
AMCG00018792 LOC106928543 other downstream 203619 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 280943 20679280 ~ 20695194 (+)

Expression


Co-expression Network