AMCG00018789


Basic Information

Item Value
gene id AMCG00018789
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20457965 ~ 20463349 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018789
ATGAAGGCGCTGGTGGCCTCGTCCAGAATGAGGACGTGGGGGTTCCTGATGAGAGCGCGAGCGATGGCTACACGCTGCTTCTGCCCTCCAGACAGCTGTGCGCCCTTCTCACCCACACCTGCggagacacacatacatttacagaCACGAGGCAACatcaaaaaccaaacaaagctGGCACACCAAACTAAATTGTTTCAAAATTCAAGCAGGAAATTCACCTGTGCTGTAGCCGCAGGACAGCTCAGTTATGAAGTCATTAGCACtggcctgcactgcagcctgAACCACCTCTTCGAAAGAACAGTCACTCAGGCCATAGGTGATGTTCTTCTCAATGGAACGGGCGAACAGTACTGGCTCCTGTCCCACCAGAGACACCTGAAAATGGCTGCTGTCATTCTCACCATCAATGAAGCTAAAGTAATGCAACTCTCAGCTGCTGAGGCAAAGCCGACAGGGGCCCCCATTGCTTCAGGAGCCACCCCTGCACAGACTGACCTTGGAGTCTGGAACATCTCCTGCAGCTTCCCAAAGTATGTGTCTGCCTCCTGCTCCTCGTTGGCAAAGCTCCTGACCGTTTTCATGGACGAGATGCACTCTTCTGCCACCTTGTTGGCTTGGGCAAGGGCATTCTGGACATCCTTGGCCAGTTTCTGTGCAGAGATGGAAAGGGATGACAGCATTCAAGCTTTCCATAATCCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018789 True 708 mRNA 0.53 4 20457965 20463349

Neighbor

gene id symbol gene type direction distance location
AMCG00018783 NA coding upstream 24310 20408073 ~ 20433655 (+)
AMCG00018784 NA coding upstream 59628 20383129 ~ 20398337 (+)
AMCG00018775 NA coding upstream 109023 20322418 ~ 20348942 (+)
AMCG00018774 NA coding upstream 145409 20311158 ~ 20312556 (+)
AMCG00018772 NA coding upstream 250511 20202428 ~ 20207454 (+)
AMCG00018782 arl6ip4 coding downstream 13777 20477126 ~ 20484929 (+)
AMCG00018793 kmt5a coding downstream 167654 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 178980 20642329 ~ 20645241 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding downstream 207487 20670836 ~ 20678821 (+)
AMCG00018804 NA coding downstream 232333 20695682 ~ 20697892 (+)
G118608 NA non-coding upstream 14736 20438960 ~ 20443229 (+)
G118601 NA non-coding upstream 76523 20377288 ~ 20381442 (+)
G118572 NA non-coding upstream 155007 20302670 ~ 20302958 (+)
G118566 NA non-coding upstream 158135 20279288 ~ 20299830 (+)
G118410 NA non-coding upstream 463636 19994126 ~ 19994329 (+)
G118618 NA non-coding downstream 27512 20490861 ~ 20491106 (+)
G118620 NA non-coding downstream 36325 20499674 ~ 20500210 (+)
G118621 LOC107554528,LOC107654556 non-coding downstream 37601 20500950 ~ 20501433 (+)
G118622 NA non-coding downstream 40767 20504116 ~ 20504507 (+)
G118624 pitpnm2 non-coding downstream 53910 20517259 ~ 20517494 (+)
AMCG00018781 denr other upstream 83153 20372219 ~ 20374812 (+)
G118557 NA other upstream 197025 20259377 ~ 20260940 (+)
AMCG00018762 NA other upstream 483235 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 975873 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 1223614 19223168 ~ 19234351 (+)
G118623 NA other downstream 50811 20514160 ~ 20514491 (+)
G118635 NA other downstream 129387 20592736 ~ 20593016 (+)
G118636 NA other downstream 130017 20593366 ~ 20594139 (+)
AMCG00018792 LOC106928543 other downstream 138607 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 215931 20679280 ~ 20695194 (+)

Expression


Co-expression Network