AMCG00018798


Basic Information

Item Value
gene id AMCG00018798
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20637710 ~ 20641876 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018798
TGGGAAACTCCGTCTGCAAACACGGCCCTGTGCGGAGCGATTGGCCCCGGGCGCCGTCACTCAGCGTGGGCAGGTCGGCTGAAGTTACAGAGAGAAGGAAGTTCAAAGAAGTGCTTGAGGAACCATGTCTGCAACGTTGTGAGAAAACAAACTATCCGATACACATCTAAACAGACTAACTCGAGCTGACTGCAAACTTGCGCCGACGCATTTTTCCTATTAACCCAACTGAACCCCTTCCGACCCGTGCGCATCAGCAGGAGCCATGGAGGAGCCGGACTCTGCCCCCGCCGTGGCGTTTGAAAAGGACGCGTTTGAACTGACGGTGGAAGACGTGTATGATATTTCGTACGTGATCGGGAGAGACTTGCTGAAGATCAGCAGCTCGGGAGAAGAGGTGTCCGAGCTGCAGTTCAAAATCGTCCGGGTCCTGGAGATGTTTGAGACGCTGGTGGACAAGTCCAGCCTCACCGTGGAGGAGCTGAAGATGGAGCGGGACAATCTGAGGCGAGAGCTGGACAGGCTCCTGGGACAGGGGTTCACCGACGGGCAGGGACCACAAATGATTGGGCCAAACAAGCTGATAGTGGACCTCAAGGACCCGGACCGGCCCCGGTTTACACTGCAGGAGCTGAAGGACGTGCTCCAGGAACGCAACCAGCTCAAAGCTCAGCTGCTGGTGGCACAAGAGGAGCTGCAAATGTACAAGAGCGGGATCCTGCCTCAGAGCGAACCGCCCATGGTAGAAGTGGATCTCCAGACGGCTTCATCCGCACCCAGCACAGTGAATGTTAAAGAAGAGAAGACGACCATCAGAAAGCTgttCTCTTTCAGTAGGAAGTAATCAGGAGATCAGAGGGATGACATCCAAGTAACATTATTATCAAGGATAACCACTATTCTGGTGTAATTGTGAGCAgtattgttttctaattaatgGAAACCAGTATTCCATAGAGCATAAGTGTTTGAGcccacacaatacaaaaaaataaccatCAATAAACTGAATGGGAATATAGAAATCTTATAGAAATCTGTTGTAGCACCTGATGCACAGCATTGAGGCCAGAGTGATATGAATACCCATTTATCAAGTCACCCTGAAAGAGGGTATTGGAGATGGAATTTGTCATGGAATATATTCAGGCCAATCTGAGgtggaaatgtttttgaatttatttaaagtagATTCACACGGAGGATCAAAGTGGAATTTCATTCCAAGGAAGACTAAAAGACAAATGTTAAGTTATGAATGAAACTGGAATCTTTGTGCAAATTATATACCACTACACAGTGATagtttaaagcattttaactAGAACATGCAAACAAAGTTTAGTACCAACACTCGATTATTGGTACTTTAAGTGTACAGGGCTTTTAAAATTGTGCACTGGAGATTGTTGCCAATAACTTATTTATTCcaccacaccccccaccccccttggCTATCTGTATAGTAAAGCAAAACCAGTCAATCACAAAGTTGAGAACTGCCTGTAAATGCCTACATCCATTGTGCaaataagcattacaaaagtagcAAATTGTTCTGCTACGATCACCtaattgttgtattttgtcaatATTGTGTGACTAAACCATACTAAAAAACCTGAAGTCTGCTTTCTACATTTCTAACTCCAATATCACGcttttgtacaatgtattttttgtttctcgtttaaaaaaaaaaaaaaaatcttgcaaGATTAAGTTTGCTGCAttataacttttaaaaacaagccaGTAAACGGTTTCAAGTATTACTCACATATTCCTGCTCAACAATTTGGAACTTCAAGACATTTTGTAATTGAACACATTATATGCTTATCTAAACAAAagtagataattaaaaaaaagttgggAAAGCccttagttttataaatatgaaaatgcatataaaaatcAGATTTAAC

Function

GO: NA

KEGG:

id description
ko03050 Proteasome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018798 True 1928 mRNA 0.43 4 20637710 20641876

Neighbor

gene id symbol gene type direction distance location
AMCG00018796 sbno1 coding downstream 13024 20608895 ~ 20624686 (-)
AMCG00018795 mphosph9 coding downstream 35960 20587589 ~ 20601750 (-)
AMCG00018785 NA coding downstream 161181 20471539 ~ 20476529 (-)
AMCG00018787 NA coding downstream 171667 20458955 ~ 20466043 (-)
AMCG00018786 denr coding downstream 256443 20377025 ~ 20381267 (-)
AMCG00018808 NA coding upstream 135043 20776919 ~ 20805326 (-)
AMCG00018807 ncor2 coding upstream 280497 20922373 ~ 21012691 (-)
AMCG00018810 NA coding upstream 500179 21142055 ~ 21146883 (-)
AMCG00018809 NA coding upstream 506656 21148532 ~ 21175765 (-)
AMCG00018811 NA coding upstream 534956 21176832 ~ 21180489 (-)
G118696 NA non-coding downstream 30624 20606828 ~ 20607086 (-)
G118692 NA non-coding downstream 152604 20482884 ~ 20485106 (-)
G118536 NA non-coding downstream 420531 20214770 ~ 20217179 (-)
G118518 NA non-coding downstream 469379 20168118 ~ 20168331 (-)
G118515 NA non-coding downstream 484723 20152727 ~ 20152987 (-)
G118715 NA non-coding upstream 37404 20679280 ~ 20679555 (-)
G118716 NA non-coding upstream 38734 20680610 ~ 20681038 (-)
G118717 NA non-coding upstream 39248 20681124 ~ 20681365 (-)
G118718 NA non-coding upstream 39667 20681543 ~ 20681784 (-)
G118719 NA non-coding upstream 40203 20682079 ~ 20682291 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 30967 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 113891 20488935 ~ 20523819 (-)
AMCG00018788 LOC107579725 other downstream 179093 20438959 ~ 20458617 (-)
G118477 NA other downstream 557828 20078088 ~ 20079882 (-)
G118434 NA other downstream 649542 19987674 ~ 19988168 (-)
AMCG00018797 NA other upstream 3009 20644885 ~ 20678437 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other upstream 41790 20683666 ~ 20689922 (-)
G118727 NA other upstream 54958 20696834 ~ 20697827 (-)
G118936 NA other upstream 1438588 22080464 ~ 22113695 (-)
G119144 NA other upstream 2162469 22804345 ~ 22806338 (-)

Expression


Co-expression Network