AMCG00018804


Basic Information

Item Value
gene id AMCG00018804
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20695682 ~ 20697892 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018804
CCGACAGTGAGGATCTTTGATATCACTCAGCCTAATGGAATTATATTCTCCTTATAACAAGCACTAACACTCATAATTTAACGggtaggttttatttaattaagatgtTTTAGACCAACGAAAATAGAAATAGCCAAGTGGCTGTATACATGTCATTCCGAGTCTTGGTGTTTATGATTGTGTAGAGGGATAACAACACAATTGCCAGGTTTCGGACACGGGCGTGTTTGTGTCCATGGCGTCTCGCCGGCAGAAGCGTGTGCTGCGCTACGTGGAGGAGGGCAGCCTGCTGAAGCTCAAGTCGTACCTGCGCAAACACCCGGACATCGAGCTCAACTTCTCCCGGGGCAGCAAGGGCCGGAGCCCGCTACACCTGGCCTGCTCACTGGGCGACGACGCTGTCCTCAGACTGCTGCTGAAGAAGGGCGCAGACCCGCTGAGGAAAGACCGCAGAGGGGACACGGCTCTTCACCTGGCCGCTAACAGAGCTCTCAAGCATGGCAAGAGAGCCTATGATGACCTGGTGGTGCCCCTGCGAAAGTCCTGCCCTGTTGCGATGGAGACACCCAACCGCGCGGGTGTCACCCCTCAGGATGTGCTGCAATGGATGAGAGCGGACCAGTTCCAGGATGCAACAATGGCAGGAGACGGCACTACAAAAACAGACCCTGAAAAGGAGTGGCGAGAAAAGCTTTTCGGAGAATGCCAGGATGAGTTCTTCGAGACGTTTGGACAGTATGACAATGATCTCTCCAGGGAGGATGCGGAGCCAGATGATTTTGTGGACTGGGCTGAGCAGATCAGGCGGGAGTACCATGAGAAGCGGCGCGCCCAGGCCCAAAGAGAGGCAGAGGGCTCCGTGAgcgggaggaagaggaagaagaaggagcAGGAGGCCGAAAGCCACAAAGAGCTCCAAGCCAGACTGGAAGCAGAGCATGCCGAGTACTTGGCCCGAGCCGCGAGGAAGGCAGAGGAGGTTCGGTTAGGGAAGAAGCAGAGATATGAGGAGAAGTGCGCTGCCACTTTCCAGGGAGGGTCGGACTCCAGGCTGGGCTACTCGGACATCCCCTGGCCGGCGCCGCAGGGCTCGGTGCGGGAGATGGTGGAGGTGATGCTGCATGGGGCCGACCGCAAGGACAAGACCGCTTTCCGCAAGCTGCTGAAGAGACAGCAGACACTCTGGCACCCGGACAAGTTCGCCCAGCGCTGCGGGGCCCGGCTGGAGGAcagcgagagagggaggatCCTAGACACTGTGACCGCTCTCTCCCAGGAGCTCAATAAACTGTCCGAGAGCATGAAGTGACTGCAGCTCgctttgttaataaaatactactactccatgtgtgtttgtgcctcTGTTTTAACATTATTCCTGCACATAGCACTGTATATTATCTGCCATCTACTTGTCTGCCCACGTCTTTCACGTACTATATTATTAGGTTATTTCTCATAAAGACACC

Function

GO: NA

KEGG:

id description
K09256 NFKBIL1; NF-kappa-B inhibitor-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018804 True 1469 mRNA 0.55 4 20695682 20697892

Neighbor

gene id symbol gene type direction distance location
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding upstream 16861 20670836 ~ 20678821 (+)
AMCG00018791 snrnp35,LOC102792111 coding upstream 50441 20642329 ~ 20645241 (+)
AMCG00018793 kmt5a coding upstream 57978 20631003 ~ 20637704 (+)
AMCG00018782 arl6ip4 coding upstream 210753 20477126 ~ 20484929 (+)
AMCG00018789 NA coding upstream 232333 20457965 ~ 20463349 (+)
AMCG00018803 NA coding downstream 330 20698222 ~ 20705953 (+)
AMCG00018801 atp6v0a2,LOC106580324,LOC106584979 coding downstream 8605 20706497 ~ 20723114 (+)
AMCG00018806 rflna,LOC106585519 coding downstream 199022 20896914 ~ 20912077 (+)
AMCG00018823 NA coding downstream 993419 21691311 ~ 21692108 (+)
AMCG00018821 NA coding downstream 1017958 21715850 ~ 21743739 (+)
G118644 NA non-coding upstream 75135 20607648 ~ 20620547 (+)
G118645 NA non-coding upstream 89585 20604704 ~ 20606097 (+)
G118641 NA non-coding upstream 95326 20599791 ~ 20600356 (+)
G118640 NA non-coding upstream 97564 20597875 ~ 20598118 (+)
G118639 NA non-coding upstream 98075 20597101 ~ 20597607 (+)
G118771 NA non-coding downstream 224476 20922368 ~ 20931404 (+)
G118863 NA non-coding downstream 673018 21370910 ~ 21422770 (+)
G118885 NA non-coding downstream 983428 21681320 ~ 21681723 (+)
G118999 NA non-coding downstream 1849380 22547272 ~ 22547691 (+)
G119005 NA non-coding downstream 1860321 22558213 ~ 22558419 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 488 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 92367 20601956 ~ 20603315 (+)
G118636 NA other upstream 101543 20593366 ~ 20594139 (+)
G118635 NA other upstream 102666 20592736 ~ 20593016 (+)
G118623 NA other upstream 181191 20514160 ~ 20514491 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other downstream 25718 20723610 ~ 20772586 (+)
G118815 NA other downstream 490064 21187956 ~ 21189246 (+)
AMCG00018820 NA other downstream 1150478 21848370 ~ 21897700 (+)
G119507 NA other downstream 4536190 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 4768199 25466091 ~ 25485446 (+)

Expression


Co-expression Network