AMCG00018812


Basic Information

Item Value
gene id AMCG00018812
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21192947 ~ 21228267 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018812
TGTAAAAGTACTTTAAGAGTGCAGTGTAAAAGCTGTGTATCGAGGACTGTATTAGACTTTGTTTTCTAcacttctgtgtgtgtttgttgtagtttttgtgtGCAAAGGGTGCGGTTGTATTTCTTGATTGAATCATTAACATGTGGGGCTTTGTGATATATctgtatgcatatgtatttaattatatttatatgtatgtgcaAAACTTTACAAACTAGtatagtttacatttatttcaaatgcgTTTTCCCTGCAGTgccagttgttgttgttgttgtttttaaatataggtTTAGTAtcctatacattttaaaattcccGGCTTCAACCATGACTAATGGCAGAGGCTGTCTTTGACGTCGACAttcaaaaaaaacaacaacaagctgCGCCTGCGCAAGTGCATTCGGATCAAGGCAAGCTTTTGACAGAGGTCTTTGTTTGAACCTGTGCACAGCTCCTTCTTAAAGCGTTTCTTTGGGGCAGATCGACGTCGGGGACACCTCTCCCCTCACAAGAAGGATCGCCGGCCCTTTTTGGACTAGAGTCGACCAGACAGAGAGTCATTTTCTTCTAAGCCAAGCGTTTCGATGTGAGCCGACAGCGGGACGGCGCAGCCTTCCTTTTGTATACAAACAAGACAACAGGCTGGTGTGTTTAAGGTAGACCGCGGAGGTTTGCTTTCTCTTTTGAGCATGGGTGCAAAAGCCCTGGGCGGACACCCCCGCCAGTGACCGGGCAGCAGCTCCTCCATTTGAGCCGGAGCGCTAACATGACTGAAGAGGCTTATTTCTGTAGTGAAAGGCAGCCCATGGCACTGGGAGGAACGGGGCAACTTTCTAGCTGCCGGGAGTTTATCCACAGGGACGAGCTGGCCCACTCGGCGGGGAGCCCGAGGTGCTGATTTCTCCGCTGGTTTCTTCCGCGTCACGTCCGATGGAGAGCGTGGGCAAATTCGAGTTCAGCCGCAAGGACCTGATCGGACACGGCGCGTTTGCGGTGGTGTTCAAGGGCAGGCACAGAGAGaaaCATGACTGGGAAGTGGCTGTCAAATGCATCAACAAGAAAAACTTGGCAAAATCTCAGACCCTTCTAgggaaggaaattaaaattttaaaggagctgaaacatgaaaacattgttGCATTATATGACTTCCaggaaatgGCAAGCTGTGTCTATCTGGTCATGGAGTACTGCAATGGGGGAGACCTTGCTGATTACCTGCACTCCAAGGGAACCCTGAGTGAGGACACTATTCGGCTTTTCCTGCAGCAGATCGCAGGAGCCATGAAAGTGTTGCAGTCCAAGGGCATCATCCACCGGGACCTGAAGCCACAGAACATCCTGCTGTCACACTCGGGGGGGCGCAAGTCCAACCCAAACAACACCCGCATCAAGATAGCTGACTTCGGGTTTGCCAGATACCTGCAGACCAACATGATGGCCGCAACACTGTGTGGCTCTCCTATGTACATGGCCCCTGAAGTAATCATGTCCCAGACCTATGATGCCAAAGCCGACTTGTGGAGCATAGGAACCATTTTGTATCAGTGTCTGACTGGGAAGGCCCCGTTTCAGGCCAGCAGCCCCCAAGATCTCCGCATGTTCTACGAGAAAAACAAGAGTCTAACCCCCAACATCCCAAGGGAGACCTCCACCCACCTCCGTCAGCTGCTGCTGGGTCTGTTACAGCGCAATCACAGGGACCGCATGGACTTCGATGAGTTTTTCCGACATCCCTTCTTGGAAGTGAGCTCATCCATGAAGAAATccGCCCCCGTGCCGATGCCCTCTTACCCTAGCTCGGGATCCGccagctcctgcagcagctcctccaccTCCCATCTGGCCTCGCCTCCCCAGTCTGTGGCCGAGATGCAGCAGCTCCGCGCCAAGACGCTGACCTCCCCTACCCAGGATTCCCCGGGTTTCCTGTTGAAAGACTCTGCAGGGAGCAGCAGCAAAAACTCCTCCTGCGACACAGACGACTTTGTAATGGTTCCAGCACAGTTTCCAAgtgaaATTGCCAGTGAAGGGGCAATGGGCAAGCCAGTCCAGGACAGTCTCATGTACAGTGGGAGCTCTCTGCTGACCTCTGCTGCTCTGGGGAGTCAGGGCAAGACACCATCCCCTTCACCCTCCTTCAGCAGCTCTCCCAGCCCCTCCGGCCGGCCCATTGAGTTTTCGGCCAGTAACTACAGCCAGTCGGTGCCCATCCCTGTGCCCACCCAGATTCAGAACTACCAGCGCATTGAGCAGAACCTGCACTCGCCCAGCCAGAACAGCTCGCCCCGATCCGGCCCCCCAGTGAGGCAGTGCAGCAGTGGCAGCCCCCTTGGATATGGGCGGACTGGGGCTTCGCCGCCCTTCCCAGGAGACCACGGGGCAGTGTTCAGCTCTCGCAGGCTCTCTGTCGGGGGGTCCAAACCATACCAGCCTTCCCCCCAAGTGGGTACTATCCCAGAGCTGCCTGGACAGACTTGCCCCCTGCACCCAGACACAGGCCACAGGCTGCAGAGTGGAGGCCAGACGGTGCCCGAGGCCTCTCCCCATCCTGGCATGGGCTCCCGGCTGCACAGCGCCCCCAGCCTGCTGGAGGGCACGTACACCTGCAGGCAGAAGATTAAGAAGCAGAACTCAGACCCCGTGGTGGTGCGACAGTGCAGTCAGCCTCAGCAGGTGCCCTCCTTGCCGCCCTGCCGGCCCCTGCGCTCCTCTCCCAAGCTCTGTGAGCTCATGCAGAGGAGCCCTCTGCCCACCATCCTGGGCTCCCCGACCAAGGCCATGCCTCCCTTTGAATTCCCCAAGCCTCCCAGCTCACACAACCTGGTCACCTTGCTGGCTCAGCAGGGCCTGGTACTGACCCCAACCCGCAACAGGACTGTCCCCGACCTGAAAAACCTAGGACCACCGCCCAGCCAGCAGCCCGGCCCGGGAGCCATGTCCCCCACAGAGGACAGCAAGGGCCCCTTTGGCAGGTCTCTGAGTGCGGGGAGGCTGTCAGAGATGCTGTTGAAAGCAGCGTTCGGCGGACAGCTGCTGGACGGAGGGAGCAGCGAGAGCCTGAACACAGAGAGACCAATGGACACAACTGCGCCCCCCGGCGGCGGAGCGGCGATGGTGATGGGCTCTGGCAGTCCAGCACCAGTCGTGTTCACTGTGGGCTCCCCTCCCAGTGGCAGCACCCCGCCACAGACCACCCGTATCAGGATGTTTTCAGTGGGTTCTTCCAGCTCTATAAGCTCAGGTGGCTCCTTCACCAGCCGGCAGCCCCTGACTGGCATGTATGCAGACGGCTGTGAGGGTCCTTCCAGCCTGCGCTATGGATTCACTGACCCTGTGGCAGCCAATTTAGAGGGGGCCGTGACCTTTGAAGCCCCGGAGCTGCCTGAAGAGACCCTGATGGAACAGGAACATACAGAGACTCTGCGCAGCCTCCGTTTCATGCTGGCCTTCGTGCACTGTGTGATGGAGATCGCCAGCACCAAGGGCAGTGTGTTCGACATGGGTGACACACCTGACACCAGTGCCACCTTCCAGCAGCAGGAGAGCATGCTGGTCCTGTACATGAAGACTGCGGAGCTACTGTCCACCGCCCTGCACACGGCCATGGAGAGGATTAGGCAAGGGAAGCTATGTCCCTCCAGCACTGTCAAACAAGTGGTGAAGAAGCTGAATGAGCTTTACAAGTCCAGCGTGACGTCCTGCCGCTGCCTGAGCGCCCGCCTGCAGCGCTTCTTCTACGACAAGCAGCGCCTGATGGACCGCATCAACAGCATCACTGCGGAGAGGCTGGTGTACAGCCACACGGTCCAGATGGTCCAGACAGCTGCCCTGGATGAGATGTTCCACCATGGAGAGGCATCCATCCAAAGGTACCACAAGGCCCTGCTGCTGATGGAGGGGCTGTCGCTGATCATCACTGAGCAGGCCGATGTCGATAACATCAGCAAGTGTGAGtaa

Function

GO: NA

KEGG:

id description
K21357 ULK1; serine/threonine-protein kinase ULK1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018812 True 3966 mRNA 0.56 27 21192947 21228267

Neighbor

gene id symbol gene type direction distance location
AMCG00018813 NA coding downstream 2848 21186381 ~ 21190099 (-)
AMCG00018811 NA coding downstream 12458 21176832 ~ 21180489 (-)
AMCG00018809 NA coding downstream 17182 21148532 ~ 21175765 (-)
AMCG00018810 NA coding downstream 46064 21142055 ~ 21146883 (-)
AMCG00018807 ncor2 coding downstream 180256 20922373 ~ 21012691 (-)
AMCG00018816 mmp17,LOC106563158,LOC107661370 coding upstream 11640 21239907 ~ 21266410 (-)
AMCG00018815 sfswap,LOC104965082 coding upstream 173627 21401894 ~ 21422652 (-)
AMCG00018819 NA coding upstream 369202 21597469 ~ 21600672 (-)
AMCG00018814 adgrd1 coding upstream 383683 21611950 ~ 21623551 (-)
AMCG00018817 NA coding upstream 420567 21648834 ~ 21666684 (-)
G118808 NA non-coding downstream 84146 21108570 ~ 21108801 (-)
G118735 NA non-coding downstream 469166 20723580 ~ 20723781 (-)
G118726 NA non-coding downstream 496759 20695669 ~ 20696188 (-)
G118720 NA non-coding downstream 509593 20682954 ~ 20683354 (-)
G118719 NA non-coding downstream 510656 20682079 ~ 20682291 (-)
G118870 NA non-coding upstream 338742 21567009 ~ 21567253 (-)
G118881 adgrd1,LOC107659615,LOC107726205,LOC107684517,LOC107553828 non-coding upstream 366727 21594994 ~ 21616493 (-)
G118886 NA non-coding upstream 453066 21681333 ~ 21681557 (-)
G118889 NA non-coding upstream 466716 21694983 ~ 21702048 (-)
G118892 NA non-coding upstream 475035 21703302 ~ 21718803 (-)
G118727 NA other downstream 495120 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 503025 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 514510 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 586204 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 669128 20488935 ~ 20523819 (-)
G118936 NA other upstream 852197 22080464 ~ 22113695 (-)
G119144 NA other upstream 1576078 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 3847131 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 3906504 25134771 ~ 25171644 (-)
G119545 NA other upstream 3957940 25186207 ~ 25187408 (-)

Expression


Co-expression Network