AMCG00018813


Basic Information

Item Value
gene id AMCG00018813
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21186381 ~ 21190099 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018813
ATGATTGAAACCAAAGTCTGTACCGCAGAGTCGACAATCGAATTCAAGTTTCATTCAGCTAAAACGTTTTCAATTTCCACACGGGTCTTCTTTGATTTGTTCGAACCAATCAGACAAATTCTTCAGGTACTAGAAGGCACTGGGTACTTTGTCGAAGAAAAACTGGTCATTCCTAACCCCCCACCTCggattgtttttttgctgtatcCCTCCAGTCGCTGCCCTTACGTCCTTCTGGCTCTTGAGCAGTGCTGTACTCCAGTAAGGAAAGCTGGGCCAGGGTGGCGTGGAGTGTTTTCCACCATCAGCAGGTTCTCCTTTAGATCCAGGGAGAGCAGGGCAAATTTATCCCTAAACGCCACAATATCAAACAGCCAAATCAAAAACTGCAACAAGAAATGCACCAATTTGGCTCAAATTGCGTTTGGTAAAATGTCAACATTGAAAAAGCTGAATGCCATTTCCAAGTATTATTCCAAGTCAAGATATCCATTTTCGGGCTCCACAAATGTCCTGCTGGAGCTAGAGCCCAGAGATCTGGACACAGAGATGTCTTCGGAGAAGGGCCACTTGATGTTCAGTTTGAAAGAAGTTCAGCTGAAGCAAACAATGGCGTTCCCCATGTGGATAGACAAGTGCAAAACCTATCAATATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018813 True 657 mRNA 0.44 4 21186381 21190099

Neighbor

gene id symbol gene type direction distance location
AMCG00018811 NA coding downstream 5892 21176832 ~ 21180489 (-)
AMCG00018809 NA coding downstream 10616 21148532 ~ 21175765 (-)
AMCG00018810 NA coding downstream 39498 21142055 ~ 21146883 (-)
AMCG00018807 ncor2 coding downstream 173690 20922373 ~ 21012691 (-)
AMCG00018808 NA coding downstream 381055 20776919 ~ 20805326 (-)
AMCG00018812 NA coding upstream 2848 21192947 ~ 21228267 (-)
AMCG00018816 mmp17,LOC106563158,LOC107661370 coding upstream 49808 21239907 ~ 21266410 (-)
AMCG00018815 sfswap,LOC104965082 coding upstream 211795 21401894 ~ 21422652 (-)
AMCG00018819 NA coding upstream 407370 21597469 ~ 21600672 (-)
AMCG00018814 adgrd1 coding upstream 421851 21611950 ~ 21623551 (-)
G118808 NA non-coding downstream 77580 21108570 ~ 21108801 (-)
G118735 NA non-coding downstream 462600 20723580 ~ 20723781 (-)
G118726 NA non-coding downstream 490193 20695669 ~ 20696188 (-)
G118720 NA non-coding downstream 503027 20682954 ~ 20683354 (-)
G118719 NA non-coding downstream 504090 20682079 ~ 20682291 (-)
G118870 NA non-coding upstream 376910 21567009 ~ 21567253 (-)
G118881 adgrd1,LOC107659615,LOC107726205,LOC107684517,LOC107553828 non-coding upstream 404895 21594994 ~ 21616493 (-)
G118886 NA non-coding upstream 491234 21681333 ~ 21681557 (-)
G118889 NA non-coding upstream 504884 21694983 ~ 21702048 (-)
G118892 NA non-coding upstream 513203 21703302 ~ 21718803 (-)
G118727 NA other downstream 488554 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 496459 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 507944 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 579638 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 662562 20488935 ~ 20523819 (-)
G118936 NA other upstream 890365 22080464 ~ 22113695 (-)
G119144 NA other upstream 1614246 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 3885299 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 3944672 25134771 ~ 25171644 (-)
G119545 NA other upstream 3996108 25186207 ~ 25187408 (-)

Expression


Co-expression Network