AMCG00018819


Basic Information

Item Value
gene id AMCG00018819
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21597469 ~ 21600672 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018819
TGGTGCCCTGCAGCCGTCACAGAACTGCTGGTGCTGATTTCAAGAATCCTGTCCGTCTCACAAACTTTCTGCTTTGTTATATTATCTTTCAGGCTGACGGCCAAAGCTGTTGCTGTCCTCTTGCCAATCCTGGGGATCTCGTGGATTTTCGGGGTCCTGGCTGTACATGCAGCCAtgcttcatttttcatttcccagCGCTGCTGTCTTCCTAACCAGGGAAGACAGTGCCATGATTTGGTGCCAGATTGCGAAATGTATTCAGCGTggCTTCTTCATTTTCCTCTTCCACTGCCTTCTTAACTCCGAGGTCCGAGCTGcctttaaacacaaaaccaagGTTTGGTCTCTTACCAGTAGCTCCATCCGTAACATCAACGTGAAACCTTTCAACTCTGACATTGTAAatgAATGGAAACAGGCCTGGAACGACACcaacaaaaatgaacacatgGGACAAGAGTACAAACTCAGCAAACCGCATTGA

Function

GO:

id name namespace
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018819 True 486 mRNA 0.47 5 21597469 21600672

Neighbor

gene id symbol gene type direction distance location
AMCG00018815 sfswap,LOC104965082 coding downstream 174817 21401894 ~ 21422652 (-)
AMCG00018816 mmp17,LOC106563158,LOC107661370 coding downstream 331059 21239907 ~ 21266410 (-)
AMCG00018812 NA coding downstream 369202 21192947 ~ 21228267 (-)
AMCG00018813 NA coding downstream 407370 21186381 ~ 21190099 (-)
AMCG00018811 NA coding downstream 416980 21176832 ~ 21180489 (-)
AMCG00018814 adgrd1 coding upstream 11278 21611950 ~ 21623551 (-)
AMCG00018817 NA coding upstream 48162 21648834 ~ 21666684 (-)
AMCG00018818 LOC107665254 coding upstream 71602 21672274 ~ 21675196 (-)
AMCG00018822 NA coding upstream 297134 21897806 ~ 21909489 (-)
AMCG00018824 fzd10,LOC108441898,LOC103024082,LOC107669258,LOC107659609,LOC107574912 coding upstream 352562 21953234 ~ 21954948 (-)
G118870 NA non-coding downstream 30216 21567009 ~ 21567253 (-)
G118808 NA non-coding downstream 488668 21108570 ~ 21108801 (-)
G118735 NA non-coding downstream 873688 20723580 ~ 20723781 (-)
G118726 NA non-coding downstream 901281 20695669 ~ 20696188 (-)
G118720 NA non-coding downstream 914115 20682954 ~ 20683354 (-)
G118886 NA non-coding upstream 80661 21681333 ~ 21681557 (-)
G118889 NA non-coding upstream 94311 21694983 ~ 21702048 (-)
G118892 NA non-coding upstream 102630 21703302 ~ 21718803 (-)
G118947 NA non-coding upstream 550682 22151354 ~ 22153714 (-)
G119048 NA non-coding upstream 1026873 22627545 ~ 22630125 (-)
G118727 NA other downstream 899642 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 907547 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 919032 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 990726 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 1073650 20488935 ~ 20523819 (-)
G118936 NA other upstream 479792 22080464 ~ 22113695 (-)
G119144 NA other upstream 1203673 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 3474726 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 3534099 25134771 ~ 25171644 (-)
G119545 NA other upstream 3585535 25186207 ~ 25187408 (-)

Expression


Co-expression Network